RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SP6Q3SY56 376 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 WIPI1Q5MNZ9 446 aaPredicted RBP17.54■□□□□ 0.4
SPNS1-203ENST00000334536 DCAF12Q5T6F0 453 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 PLCXD3Q63HM9 321 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 GPR146Q96CH1 333 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 TXN2Q99757 166 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 C1QTNF5Q9BXJ0 243 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 PRDM14Q9GZV8 571 aa17.54■□□□□ 0.4
SPNS1-203ENST00000334536 PATE3B3GLJ2 98 aa17.53■□□□□ 0.4
SPNS1-203ENST00000334536 TRAPPC6AO75865 159 aa17.53■□□□□ 0.4
SPNS1-203ENST00000334536 RBM11P57052 281 aaKnown RBP17.53■□□□□ 0.4
SPNS1-203ENST00000334536 SERF2P84101 59 aa17.53■□□□□ 0.4
SPNS1-203ENST00000334536 C16orf54Q6UWD8 224 aa17.53■□□□□ 0.4
SPNS1-203ENST00000334536 PINX1Q96BK5 328 aaKnown RBP17.53■□□□□ 0.4
SPNS1-203ENST00000334536 HSPB9Q9BQS6 159 aa17.53■□□□□ 0.4
SPNS1-203ENST00000334536 ZNF703Q9H7S9 590 aaPredicted RBP17.53■□□□□ 0.4
SPNS1-203ENST00000334536 SLC35D1Q9NTN3 355 aa17.53■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A10PA6NDY2 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A18PA6NE21 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A16PA6NEW6 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A20PA6NIJ5 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A8PA6NJQ4 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A7PA6NKC0 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A22PA8MWA6 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A12PA8MX19 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A5PA8MXJ8 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A23PA8MXZ1 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 HS3ST1O14792 307 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 NUPR1O60356 82 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A15PP0C7V4 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A13PP0C7W8 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A14PP0C7W9 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FAM90A24PP0C7X0 464 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 PPP1CBP62140 327 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FOXL1Q12952 345 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 MSMO1Q15800 293 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 Q8NFD4 153 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 FGFBP3Q8TAT2 258 aa17.52■□□□□ 0.4
SPNS1-203ENST00000334536 IGHV1-69-2A0A0G2JMI3 117 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 NPBWR2P48146 333 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 CYB561P49447 251 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 CLDN15P56746 228 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 SPATA45Q537H7 98 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 C6orf15Q6UXA7 325 aaPredicted RBP17.52■□□□□ 0.39
SPNS1-203ENST00000334536 Q6ZN92 141 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 PIGCQ92535 297 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 RPRMQ9NS64 109 aa17.52■□□□□ 0.39
SPNS1-203ENST00000334536 HYPMO75409 117 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 GDF1P27539 372 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 GFRA1P56159 465 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 COLCA1Q6ZS62 124 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 LHFPL4Q7Z7J7 247 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 LINC00470Q9BZP3 86 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 CHODLQ9H9P2 273 aa17.51■□□□□ 0.39
SPNS1-203ENST00000334536 LAMA1P25391 3075 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 MUC3AQ02505 3323 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 IGKV3D-15A0A087WSY6 115 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 LAMTOR5O43504 91 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 OMGP23515 440 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 FXYD4P59646 89 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 RPS18P62269 152 aaKnown RBP17.5■□□□□ 0.39
SPNS1-203ENST00000334536 SRSF7Q16629 238 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPNS1-203ENST00000334536 TRIM61Q5EBN2 209 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 VHLLQ6RSH7 139 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 Q6ZS49 121 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 ODF3L1Q8IXM7 274 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 ZNF709Q8N972 641 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 DEPPQ9NTK1 212 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 ZNF586Q9NXT0 402 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 BOKQ9UMX3 212 aaPredicted RBP17.5■□□□□ 0.39
SPNS1-203ENST00000334536 TRAV9-1A0A075B6T8 112 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 HERV-K104P61576 105 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 SLC23A3Q6PIS1 610 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 TCTEX1D1Q8N7M0 179 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 CT55Q8WUE5 264 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 DYRK2Q92630 601 aa17.5■□□□□ 0.39
SPNS1-203ENST00000334536 RBM7Q9Y580 266 aaKnown RBP17.5■□□□□ 0.39
SPNS1-203ENST00000334536 SSSCA1O60232 199 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 ZNF737O75373 536 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 GYPAP02724 150 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 ACP1P24666 158 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 CDKN1AP38936 164 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 PRSS12P56730 875 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 CLDN18P56856 261 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 MYPOPQ86VE0 399 aaPredicted RBP17.49■□□□□ 0.39
SPNS1-203ENST00000334536 SAXO1Q8IYX7 474 aa17.49■□□□□ 0.39
SPNS1-203ENST00000334536 ID3Q02535 119 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 ZNF726P1Q15940 193 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 PHLDA2Q53GA4 152 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 C1orf185Q5T7R7 199 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 LCN15Q6UWW0 184 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 LRP11Q86VZ4 500 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 TMEM56Q96MV1 263 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 PARLQ9H300 379 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 ZNF442Q9H7R0 627 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 TMEM56-RWDD3S4R434 201 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 RTTNQ86VV8 2226 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 A0A0U1RQK1 487 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 ZNF320A2RRD8 509 aa17.48■□□□□ 0.39
SPNS1-203ENST00000334536 NKX2-6A6NCS4 301 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms