RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 KIAA1456Q9P272 454 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 KIAA1324LA8MWY0 1029 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 SPINT2O43291 252 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 SYNGR2O43760 224 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 IGHV3-13P01766 116 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 IGHV3-7P01780 117 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 NDUFB7P17568 137 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 SUMO1P63165 101 aaKnown RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 IL24Q13007 206 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 CYB5R2Q6BCY4 276 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 OR10AD1Q8NGE0 317 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 WFIKKN1Q96NZ8 548 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 RAB9BQ9NP90 201 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 CBY1Q9Y3M2 126 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 COL6A3P12111 3177 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 TNRC6BQ9UPQ9 1833 aaKnown RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 WNK2Q9Y3S1 2297 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 LRP5LA4QPB2 252 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 CECR9P0C854 216 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 ERVFC1-1P60608 527 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 GAMTQ14353 236 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 VAMP3Q15836 100 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 TIGITQ495A1 244 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 OR10G4Q8NGN3 311 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 OR10G9Q8NGN4 311 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 OR10G7Q8NGN6 311 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 MRGPRFQ96AM1 343 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 MSI2Q96DH6 328 aaKnown RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 VPS25Q9BRG1 176 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 OR5B21A6NL26 309 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 M0R143 59 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 DTYMKP23919 212 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 DDTP30046 118 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 CEACAM6P40199 344 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 IZUMO4Q1ZYL8 232 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 OR4A4PQ8NGN8 299 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 BSCL2Q96G97 398 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 ATP5SQ99766 215 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 CHST5Q9GZS9 411 aa10.07□□□□□ -0.8
HDAC6-201ENST00000334136 ANKHD1Q8IWZ3 2542 aaKnown RBP10.07□□□□□ -0.8
HDAC6-201ENST00000334136 DEFB108AA8MXU0 73 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 CDS2O95674 445 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 NGFP01138 241 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 C1QL2Q7Z5L3 287 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 RNF126Q9BV68 326 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 CXXC4Q9H2H0 198 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 ABCA1O95477 2261 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 CBY3A6NI87 242 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 SH2D1BO14796 132 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 ISG15P05161 165 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 FCGR3AP08637 254 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 CD40P25942 277 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 CDX1P47902 265 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-201ENST00000334136 KDF1Q8NAX2 398 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-201ENST00000334136 POC1AQ8NBT0 407 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 OR10V1Q8NGI7 309 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 WBP1Q96G27 269 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 METTL1Q9UBP6 276 aaKnown RBP10.06□□□□□ -0.8
HDAC6-201ENST00000334136 A0A0U1RQV5 110 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 RNF224P0DH78 156 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 TMEM50BP56557 158 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 SMIM21Q3B7S5 101 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
HDAC6-201ENST00000334136 KIAA2026Q5HYC2 2103 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 RPL36A-HNRNPH2H7BZ11 118 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 PRB1P04280 392 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 TPPP2P59282 170 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 RIMS4Q9H426 269 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-201ENST00000334136 SIRT7Q9NRC8 400 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 FAM206AQ9NX38 181 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 NAT8BQ9UHF3 227 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 VAX2Q9UIW0 290 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 TMEM14DPA8MWL7 114 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 FCN1O00602 326 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 PPIHO43447 177 aaKnown RBP10.05□□□□□ -0.8
HDAC6-201ENST00000334136 OR4A8P0C604 315 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 ARL3P36405 182 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 SSX7Q7RTT5 188 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 FKBP11Q9NYL4 201 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 A0A1B0GTI1 187 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 PAGE4O60829 102 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 HSBP1O75506 76 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 DANCRP0C864 163 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 TRGC1P0CF51 173 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 C22orf15Q8WYQ4 148 aa10.05□□□□□ -0.8
HDAC6-201ENST00000334136 GPR12P47775 334 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 KHDC3LQ587J8 217 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 FDX2Q6P4F2 183 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 ZNF600Q6ZNG1 722 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 BIVMQ86UB2 503 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 SLC35D1Q9NTN3 355 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 GLRXP35754 106 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms