RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 OR2D2Q9H210 308 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 SPRR3Q9UBC9 169 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 TIMM9Q9Y5J7 89 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 PPP1R2P9O14990 202 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 KRASP01116 189 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 TRGC1P0CF51 173 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 G6PCP35575 357 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 OR3A1P47881 315 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 UBE2NP61088 152 aaKnown RBP12.91□□□□□ -0.34
BRCC3-201ENST00000330045 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
BRCC3-201ENST00000330045 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 FER1L6-AS2Q96M78 137 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 DMRT1Q9Y5R6 373 aa12.91□□□□□ -0.34
BRCC3-201ENST00000330045 TMEM30CPA0ZSE6 113 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 IQCF6A8MYZ5 107 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 TGOLN2O43493 480 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 IGKV1D-33P01593 117 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 IGKV1-33P01594 117 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 SELEP16581 610 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 HNF4GQ14541 408 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 MSMO1Q15800 293 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 ZNF766Q5HY98 468 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 FIP1L1Q6UN15 594 aaKnown RBP12.9□□□□□ -0.34
BRCC3-201ENST00000330045 CENPVQ7Z7K6 275 aaPredicted RBP12.9□□□□□ -0.34
BRCC3-201ENST00000330045 FRZBQ92765 325 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 LRFN3Q9BTN0 628 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 CTDSP1Q9GZU7 261 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 CHD3Q12873 2000 aaKnown RBP12.9□□□□□ -0.34
BRCC3-201ENST00000330045 KIAA2026Q5HYC2 2103 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 ELOA3CA0A087WX78 387 aaPredicted RBP12.9□□□□□ -0.34
BRCC3-201ENST00000330045 OPN1MWP04001 364 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 CD55P08174 381 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 SOD3P08294 240 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 IL2RGP31785 369 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
BRCC3-201ENST00000330045 ZNF816Q0VGE8 651 aaPredicted RBP12.9□□□□□ -0.34
BRCC3-201ENST00000330045 PSG7Q13046 419 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 GABRA6Q16445 453 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 GFI1BQ5VTD9 330 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
BRCC3-201ENST00000330045 TRBV24-1A0A075B6N3 115 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 C12orf77C9JDV5 145 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 NKX2-8O15522 239 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 CD81P60033 236 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 MEF2BQ02080 365 aaPredicted RBP12.89□□□□□ -0.35
BRCC3-201ENST00000330045 TGFBR3Q03167 851 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 ATP6V1FQ16864 119 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 RNFT1Q5M7Z0 435 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 LURAP1LQ8IV03 231 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 HIST3H2BBQ8N257 126 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 ZNF808Q8N4W9 903 aaPredicted RBP12.89□□□□□ -0.35
BRCC3-201ENST00000330045 OR52L2PQ8NGH6 319 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 SSX3Q99909 188 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 ASCL3Q9NQ33 180 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 TRBV23-1A0A0A0MS06 115 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 ODAMA1E959 279 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 P0C879 139 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 IGHV1-2P23083 117 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 ACSM6Q6P461 480 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 C5orf30Q96GV9 206 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
BRCC3-201ENST00000330045 SMIM7Q9BQ49 75 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.89□□□□□ -0.35
BRCC3-201ENST00000330045 CLN8Q9UBY8 286 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 NAT8Q9UHE5 227 aa12.89□□□□□ -0.35
BRCC3-201ENST00000330045 OOEPA6NGQ2 149 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 CATR1Q13166 79 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-201ENST00000330045 PDZD11Q5EBL8 140 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 FAM53AQ6NSI3 398 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-201ENST00000330045 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-201ENST00000330045 OBP2BQ9NPH6 170 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 TINAGQ9UJW2 476 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 WNT9BO14905 357 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 LYZL6O75951 148 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 S1PR2O95136 353 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 HBZP02008 142 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 AESQ08117 197 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 TMEM241Q24JQ0 296 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 C4orf17Q53FE4 359 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 NCR3LG1Q68D85 454 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 CXorf67Q86X51 503 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-201ENST00000330045 NINJ1Q92982 152 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
BRCC3-201ENST00000330045 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
BRCC3-201ENST00000330045 PTBP3O95758 552 aaKnown RBP12.87□□□□□ -0.35
BRCC3-201ENST00000330045 RD3LP0DJH9 198 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 PTPRBP23467 1997 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 MPV17P39210 176 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms