RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CACNA1GO43497 2377 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 SPAARA0A1B0GVQ0 90 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 C17orf98A8MV24 154 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 GLIPR1P48060 266 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 FAM90A2PQ658T7 463 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 DPPA3Q6W0C5 159 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 OR5T1Q8NG75 326 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 MALSU1Q96EH3 234 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 TOLLIPQ9H0E2 274 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 RNF212BA8MTL3 300 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 S100A2P29034 98 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 S100A12P80511 92 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 SPNS3Q6ZMD2 512 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 SLC35E3Q7Z769 313 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 HEATR1Q9H583 2144 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF737O75373 536 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 BMP5P22003 454 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 TNFSF10P50591 281 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 YPEL4Q96NS1 127 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 SSX3Q99909 188 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 ZG16O60844 167 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF146Q15072 292 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 MSMO1Q15800 293 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 GFI1BQ5VTD9 330 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 FAM210BQ96KR6 192 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 SEBOXQ9HB31 216 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 MBNL3Q9NUK0 354 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 ODAMA1E959 279 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 MLNRO43193 412 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 Q3ZCU0 254 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 TMEM41BQ5BJD5 291 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 VWA1Q6PCB0 445 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 SMIM7Q9BQ49 75 aa11.8□□□□□ -0.52
ATP2C1-201ENST00000328560 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 IGKV1D-33P01593 117 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 IGKV1-33P01594 117 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 FGF7P21781 194 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 NKX6-1P78426 367 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 RPP25LQ8N5L8 163 aaKnown RBP11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 FDCSPQ8NFU4 85 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 CISD1Q9NZ45 108 aaKnown RBP11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 TREM2Q9NZC2 230 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 GVINP1Q7Z2Y8 2422 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 CATR1Q13166 79 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 H2BFWTQ7Z2G1 175 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 CA5BP1Q8WTZ4 195 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 GATAD1Q8WUU5 269 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 SARAFQ96BY9 339 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 VAX2Q9UIW0 290 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 ASPMQ8IZT6 3477 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 A0A087WWC5 75 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 IFNA1P01562 189 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 CD82P27701 267 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 SERF2P84101 59 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 GABRA6Q16445 453 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 Q6ZR03 302 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 OR10D4PQ8NGN7 298 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 C5orf30Q96GV9 206 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 WIPI2Q9Y4P8 454 aa11.79□□□□□ -0.52
ATP2C1-201ENST00000328560 TRAV1-1A0A0B4J248 108 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 CLDN34H7C241 214 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BKO60814 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 PTBP3O95758 552 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BJP06899 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BOP23527 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BBP33778 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BDP58876 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BCP62807 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 COL10A1Q03692 680 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST2H2BEQ16778 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 ACSM6Q6P461 480 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 C1orf87Q8N0U7 546 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BHQ93079 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BNQ99877 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HIST1H2BMQ99879 126 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 IQCF6A8MYZ5 107 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 HOXA5P20719 270 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 TFF3Q07654 80 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 SP5Q6BEB4 398 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 MRGPRGQ86SM5 289 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF709Q8N972 641 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 OR10P1Q8NGE3 313 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms