RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MRGPRX1Q96LB2 322 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 MRPL13Q9BYD1 178 aaKnown RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 DUSP13Q9UII6 198 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 ICAM5Q9UMF0 924 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 EREGO14944 169 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 OR2J3O76001 311 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TWIST1Q15672 202 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TCTN1Q2MV58 587 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TWSG1Q9GZX9 223 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 CHTOPQ9Y3Y2 248 aaKnown RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 J3QRE1 110 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TBX6O95947 436 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 AMBPP02760 352 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 SRSF5Q13243 272 aaKnown RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 RUNX2Q13950 521 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 PIGYQ3MUY2 71 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 DMRTC1Q5HYR2 192 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 LY6G6FQ5SQ64 297 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 C1orf100Q5SVJ3 147 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 OR1N1Q8NGS0 311 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 SRP19P09132 144 aaKnown RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 COL8A1P27658 744 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TRA2AQ13595 282 aaKnown RBP eCLIP6.14□□□□□ -1.438e-12■■■■■ 51.5
SMC1A-201ENST00000322213 ACTL10Q5JWF8 245 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TPTE2P1Q5T6R2 138 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 A8MWL6 223 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TNFSF13O75888 250 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 FAM157BP0CG42 384 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 PSG2P11465 335 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 CD1BP29016 333 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 SLC35B1P78383 322 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 ARG2P78540 354 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 UBALD1Q8TB05 177 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 WDYHV1Q96HA8 205 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 HIST1H4GQ99525 98 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF260Q3ZCT1 412 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 OR4P4Q8NGL7 312 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 OR1B1Q8NGR6 318 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 OR4C12Q96R67 309 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 WNT10AQ9GZT5 417 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 C6orf106Q9H6K1 298 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 DECR2Q9NUI1 292 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 A0A1W2PRS3 328 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 UPK3AO75631 287 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 MRPL58Q14197 206 aaKnown RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 SLC35E4Q6ICL7 350 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 CYP2G1PQ6ZSU1 146 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 ZBTB34Q8NCN2 500 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 MEGF9Q9H1U4 602 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 GNB4Q9HAV0 340 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 C1QCP02747 245 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 PRSS1P07477 247 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 PNLIPP16233 465 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 HES1Q14469 280 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 SPINK9Q5DT21 86 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 TAF15Q92804 592 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 RCC1LQ96I51 464 aaKnown RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CSTL1Q9H114 145 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CSN3P07498 182 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 SMAGPQ0VAQ4 97 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 KCNMB1Q16558 191 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 PRSS27Q9BQR3 290 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 TRGV10A0A0A0MS01 117 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 EML2O95834 649 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CRYBA2P53672 197 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR5AS1Q8N127 324 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR4F17Q8NGA8 305 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 SSMEM1Q8WWF3 244 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF775Q96BV0 537 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 SPACA9Q96E40 222 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ALKBH3Q96Q83 286 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 IGHV1-69-2A0A0G2JMI3 117 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CA3P07451 260 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 RPL7P18124 248 aaKnown RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 LSM11P83369 360 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ZPLD1Q8TCW7 415 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 LSM10Q969L4 123 aaKnown RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 NEUROG3Q9Y4Z2 214 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 METTL12A8MUP2 240 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CA1P00915 261 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ASAH2BP0C7U1 165 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 C1QL3Q5VWW1 255 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF664Q8N3J9 261 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR10W1Q8NGF6 305 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF48Q96MX3 618 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ST20Q9HBF5 79 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 IL36RNQ9UBH0 155 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 GAGE12BA1L429 117 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ORM1P02763 201 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 ESDP10768 282 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CD38P28907 300 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR10J3Q5JRS4 329 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 NR2C2APQ86WQ0 139 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR2I1PQ8NGU4 316 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 C19orf67A6NJJ6 358 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 GDF9O60383 454 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 DSCR4P56555 118 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 MMDQ15546 238 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR4X1Q8NH49 305 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms