RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 CT45A5P0DMU8 189 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 CT45A7P0DMV0 189 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 IGLL1P15814 213 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 PNLIPRP3Q17RR3 467 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 CDNFQ49AH0 187 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 CENPOQ9BU64 300 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 OR2D2Q9H210 308 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 WASHC3Q9Y3C0 194 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 WSB1Q9Y6I7 421 aa12.65□□□□□ -0.38
HDDC2-201ENST00000318787 TGP01266 2768 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 OR5H14A6NHG9 310 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 J3QRK9 145 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 M0R1X1 148 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
HDDC2-201ENST00000318787 OR8U9P0C7N5 309 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 SERPINB10P48595 397 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 RAB25P57735 213 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 LINC00205P59089 165 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 CXorf66Q5JRM2 361 aaPredicted RBP12.64□□□□□ -0.39
HDDC2-201ENST00000318787 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 TSPAN14Q8NG11 270 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 OR8U1Q8NH10 309 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 PTX4Q96A99 478 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 CLCC1Q96S66 551 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 AGMATQ9BSE5 352 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 ST6GALNAC5Q9BVH7 336 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 A3GALT2U3KPV4 340 aa12.64□□□□□ -0.39
HDDC2-201ENST00000318787 TMEM235A6NFC5 223 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 H0YJW9 148 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 ITGB1BP1O14713 200 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 ATP6V0E1O15342 81 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 TNFAIP8O95379 198 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 APOA2P02652 100 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 MC5RP33032 325 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 TGFBR1P36897 503 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 GNG2P59768 71 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 LSM3P62310 102 aaKnown RBP12.63□□□□□ -0.39
HDDC2-201ENST00000318787 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 NUDCD2Q8WVJ2 157 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 GHITMQ9H3K2 345 aa12.63□□□□□ -0.39
HDDC2-201ENST00000318787 A0A087WXM4 84 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 TFAP2AP05549 437 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
HDDC2-201ENST00000318787 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 ECSCRQ19T08 205 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 OR5H6Q8NGV6 325 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 CABLES2Q9BTV7 478 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 RHBDL2Q9NX52 303 aa12.62□□□□□ -0.39
HDDC2-201ENST00000318787 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 G3V318 75 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 RRHO14718 337 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 AIREO43918 545 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 OR5H8P0DN80 308 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 TIMM50Q3ZCQ8 353 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 HACD4Q5VWC8 232 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 TMEM65Q6PI78 240 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 SLC35D1Q9NTN3 355 aa12.61□□□□□ -0.39
HDDC2-201ENST00000318787 METTL1Q9UBP6 276 aaKnown RBP12.61□□□□□ -0.39
HDDC2-201ENST00000318787 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 IGHV7-81A0A0B4J1V7 117 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 SCGNO76038 276 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 NDUFA3O95167 84 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 THBS3P49746 956 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 FOXE3Q13461 319 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 ZNF383Q8NA42 475 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 NPBQ8NG41 125 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 OR5AN1Q8NGI8 311 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 SDHAF2Q9NX18 166 aa12.6□□□□□ -0.39
HDDC2-201ENST00000318787 TRAV18A0A075B6X5 111 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 TRAV41A0A0B4J266 112 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 A0A1W2PN81 502 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 PROP1O75360 226 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 RBBP9O75884 186 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 IGKV1-16P04430 117 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 IGF1P05019 195 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 FCER2P06734 321 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 DTYMKP23919 212 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 CHRNA7P36544 502 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 CBX3Q13185 183 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
HDDC2-201ENST00000318787 FLYWCH2Q96CP2 140 aaKnown RBP12.59□□□□□ -0.39
HDDC2-201ENST00000318787 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 FAM103A1Q9BTL3 118 aaKnown RBP12.59□□□□□ -0.39
HDDC2-201ENST00000318787 ETV7Q9Y603 341 aa12.59□□□□□ -0.39
HDDC2-201ENST00000318787 SLC25A17O43808 307 aa12.58□□□□□ -0.4
HDDC2-201ENST00000318787 IGHG4P01861 327 aa12.58□□□□□ -0.4
HDDC2-201ENST00000318787 ELANEP08246 267 aa12.58□□□□□ -0.4
HDDC2-201ENST00000318787 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms