RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SIGMAR1Q99720 223 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SSBP4Q9BWG4 385 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SLC25A2Q9BXI2 301 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 BCAT2O15382 392 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 LDB3O75112 727 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SRP19P09132 144 aaKnown RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SSR4P51571 173 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 CLDN2P57739 230 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ZNF260Q3ZCT1 412 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 AGBL5Q8NDL9 886 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 OR4D9Q8NGE8 314 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 INSM2Q96T92 566 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 CBLN4Q9NTU7 201 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C20orf141Q9NUB4 165 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SERTM2A0A1B0GWG4 89 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TUSC2O75896 110 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 AKR7A3O95154 331 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SEMA4FO95754 770 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SLC25A5P05141 298 aaKnown RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 VSIG8P0DPA2 414 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 GPX4P36969 197 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 LSM11P83369 360 aaKnown RBP eCLIP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TMEM255AQ5JRV8 349 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ADAT3Q96EY9 351 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 VN1R1Q9GZP7 353 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 MTCH1Q9NZJ7 389 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 FLRT3Q9NZU0 649 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 HCSTQ9UBK5 93 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 KLK13Q9UKR3 277 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ITPR3Q14573 2671 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 OR2J2O76002 312 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 PNLIPP16233 465 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TWIST1Q15672 202 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 GABRA6Q16445 453 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 UBALD2Q8IYN6 164 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C16orf52Q8NHV5 167 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ASB10Q8WXI3 467 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 GUCD1Q96NT3 240 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 THAP10Q9P2Z0 257 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 MRPS2Q9Y399 296 aaKnown RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TMEM56-RWDD3S4R434 201 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 LINC01553A4QN01 128 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 NKX6-3A6NJ46 265 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SNURFLB1AK76 121 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TIMP1P01033 207 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ZNF865P0CJ78 1059 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 P2RY2P41231 377 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 PSMB2P49721 201 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 RAB9AP51151 201 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TMEM50BP56557 158 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 POU2AF1Q16633 256 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 PRICKLE4Q2TBC4 344 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 FBLN7Q53RD9 439 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TMEM215Q68D42 235 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C10orf126Q8N4M7 172 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C5orf17Q8NAS9 161 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SCCPDHQ8NBX0 429 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 KISS1RQ969F8 398 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 SPSB4Q96A44 273 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 COX14Q96I36 57 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 RHOVQ96L33 236 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 MGAM2Q2M2H8 2515 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 IFITM10A6NMD0 228 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 PIAS2O75928 621 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 GPR3P46089 330 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 RNPS1Q15287 305 aaKnown RBP3.93□□□□□ -1.78
CNOT1-201ENST00000317147 GAB4Q2WGN9 574 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 LDLRAD1Q5T700 205 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 C6orf201Q7Z4U5 140 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 PDPNQ86YL7 162 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 BATF2Q8N1L9 274 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 NECAP1Q8NC96 275 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 ABHD5Q8WTS1 349 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 FAM103A1Q9BTL3 118 aaKnown RBP3.93□□□□□ -1.78
CNOT1-201ENST00000317147 JKAMPQ9P055 326 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 NIPBLQ6KC79 2804 aaeCLIP3.93□□□□□ -1.781e-11■■■□□ 15.4
CNOT1-201ENST00000317147 A0A1W2PNV4 684 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 LRRC3CA6NJW4 275 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 PLPP3O14495 311 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 P01737 135 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 ASAH2BP0C7U1 165 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 SMIM13P0DJ93 91 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 B4GALNT1Q00973 533 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 GUCA2AQ02747 115 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 ALG14Q96F25 216 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 SDF2L1Q9HCN8 221 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 OR1A1Q9P1Q5 309 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 DHCR7Q9UBM7 475 aaKnown RBP3.93□□□□□ -1.78
CNOT1-201ENST00000317147 PCOLCE2Q9UKZ9 415 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 K7ESM1 405 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 FGF17O60258 216 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 PSMB5P28074 263 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 SLC35B1P78383 322 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 C2orf68Q2NKX9 166 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 AAED1Q7RTV5 226 aa3.93□□□□□ -1.78
CNOT1-201ENST00000317147 PRSS3P2Q8NHM4 247 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms