RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 CXorf66Q5JRM2 361 aaPredicted RBP10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 DGAT2Q96PD7 388 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF835Q9Y2P0 537 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 C9orf172C9J069 976 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 PAGE4O60829 102 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 PITX3O75364 302 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 OR3A4PP47883 348 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 RRADP55042 308 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 PLAURQ03405 335 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 DLL3Q9NYJ7 618 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 TUBD1Q9UJT1 453 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 A0A1W2PNU3 283 aaPredicted RBP10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 ADAM20O43506 726 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF841Q6ZN19 808 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 SARAFQ96BY9 339 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 RTN4RQ9BZR6 473 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 SEC16AO15027 2179 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 ESPL1Q14674 2120 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 ADAMTS20P59510 1910 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 MUC21A0A0G2JKD1 596 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 MUC21A0A140T8X8 626 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 PPIAL4DF5H284 164 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 PDE6DO43924 150 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 MMP23AO75900 390 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 NSDHLQ15738 373 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 MUC21Q5SSG8 566 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 C12orf54Q6X4T0 127 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 LIAT1Q6ZQX7 453 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF681Q96N22 645 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 RASL10BQ96S79 203 aa10.03□□□□□ -0.8
LDLRAD3-201ENST00000315571 SLC35E2P0CK97 266 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 FUT6P51993 359 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 TMEM177Q53S58 311 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 C6orf201Q7Z4U5 140 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZAR1Q86SH2 424 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 C20orf196Q8IYI0 205 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 OR51E1Q8TCB6 317 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 P2RX4Q99571 388 aa10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 AKIRIN1Q9H9L7 192 aaPredicted RBP10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 COA3Q9Y2R0 106 aaPredicted RBP10.02□□□□□ -0.8
LDLRAD3-201ENST00000315571 SNAI2O43623 268 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 NEURL1O76050 574 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 ABHD16AO95870 558 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 ECI1P42126 302 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 LCN2P80188 198 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 NEIL1Q96FI4 390 aaPredicted RBP10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 HDHD3Q9BSH5 251 aaPredicted RBP10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 PLSCR4Q9NRQ2 329 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 MCTS1Q9ULC4 181 aaKnown RBP10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 FAHP16930 419 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 ARR3P36575 388 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 MDH2P40926 338 aaKnown RBP10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 ZNF133P52736 654 aaPredicted RBP10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 MTCP1P56278 107 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 CARD17Q5XLA6 110 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 GPR146Q96CH1 333 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 HINT2Q9BX68 163 aa10.02□□□□□ -0.81
LDLRAD3-201ENST00000315571 HLA-DOBP13765 273 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 SPANXN5Q5MJ07 72 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR2M3Q8NG83 312 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR5D13Q8NGL4 314 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PTRH2Q9Y3E5 179 aaKnown RBP10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 IGLV3-12A0A075B6K2 115 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 M0R2Z0 102 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 IL12BP29460 328 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 ARL3P36405 182 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 FOXC1Q12948 553 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PMCHL1Q16048 86 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PCK2Q16822 640 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 C5orf17Q8NAS9 161 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 TMEM171Q8WVE6 324 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 KCNE4Q8WWG9 221 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PTX4Q96A99 478 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 CITED1Q99966 193 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 NECAP2Q9NVZ3 263 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 MRPS16Q9Y3D3 137 aaKnown RBP10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 R4GMQ9 66 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PGPEP1LA6NFU8 196 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PRKNO60260 465 aaPredicted RBP10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 RAD51DO75771 328 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 PGCP20142 388 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 TCL1AP56279 114 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 SRPXP78539 464 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 WDR54Q9H977 334 aa10.01□□□□□ -0.81
LDLRAD3-201ENST00000315571 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 MGAT2Q10469 447 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 NINJ1Q92982 152 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 CTHRC1Q96CG8 243 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 GPHA2Q96T91 129 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 VSIRQ9H7M9 311 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 CRYM-AS1A6NIL9 109 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 TGFBR3LH3BV60 316 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 PLPP3O14495 311 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 SCGB2A1O75556 95 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms