RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TGIF2LYQ8IUE0 185 aa10.42□□□□□ -0.74
RNF4-201ENST00000314289 CD177Q8N6Q3 437 aa10.42□□□□□ -0.74
RNF4-201ENST00000314289 OR4D5Q8NGN0 318 aa10.42□□□□□ -0.74
RNF4-201ENST00000314289 HES4Q9HCC6 221 aa10.42□□□□□ -0.74
RNF4-201ENST00000314289 Q9UFV3 132 aa10.42□□□□□ -0.74
RNF4-201ENST00000314289 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
RNF4-201ENST00000314289 TRBV6-6A0A0A6YYG2 114 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 CST7O76096 145 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 SELLP14151 372 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 ZNF674Q2M3X9 581 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 PYY3Q5JQD4 70 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 FIP1L1Q6UN15 594 aaKnown RBP10.41□□□□□ -0.74
RNF4-201ENST00000314289 GFRALQ6UXV0 394 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 FAM185AQ8N0U4 392 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 ZNRF1Q8ND25 227 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 TMEM56Q96MV1 263 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 PBDC1Q9BVG4 233 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 PLEKHA2Q9HB19 425 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 TMEM56-RWDD3S4R434 201 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 DSCAMO60469 2012 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 TMEM50AO95807 157 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 IL2RGP31785 369 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 MBNL2Q5VZF2 373 aaKnown RBP10.41□□□□□ -0.74
RNF4-201ENST00000314289 ZNF343Q6P1L6 599 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 Q6ZRM9 215 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 OR13A1Q8NGR1 328 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 SNRNP40Q96DI7 357 aaKnown RBP10.41□□□□□ -0.74
RNF4-201ENST00000314289 CABLES2Q9BTV7 478 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 COL12A1Q99715 3063 aa10.41□□□□□ -0.74
RNF4-201ENST00000314289 A8MXE2 369 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 GATCO43716 136 aaKnown RBP10.4□□□□□ -0.74
RNF4-201ENST00000314289 HBZP02008 142 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 UCP1P25874 307 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 S100A2P29034 98 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 CCKARP32238 428 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 TIMP3P35625 211 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 MDH2P40926 338 aaKnown RBP10.4□□□□□ -0.74
RNF4-201ENST00000314289 TBR1Q16650 682 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 WFDC8Q8IUA0 241 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 ZNF383Q8NA42 475 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 DEFB108BQ8NET1 73 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 RHOVQ96L33 236 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 DCHS2Q6V1P9 2916 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 PRRG2O14669 202 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 IGKV1-39P01597 117 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 IGKV1D-39P04432 117 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 P2RY1P47900 373 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 COMMD1Q8N668 190 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 DRAM1Q8N682 238 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 ITLN1Q8WWA0 313 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 MRPL37Q9BZE1 423 aaKnown RBP10.4□□□□□ -0.74
RNF4-201ENST00000314289 OR2D2Q9H210 308 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 KCNIP1Q9NZI2 227 aa10.4□□□□□ -0.74
RNF4-201ENST00000314289 SPTBN1Q01082 2364 aaKnown RBP10.4□□□□□ -0.75
RNF4-201ENST00000314289 TMEM30CPA0ZSE6 113 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 KLF3P57682 345 aaPredicted RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 RND3P61587 244 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 DEFA6Q01524 100 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 KRTCAP3Q53RY4 240 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 NMSQ5H8A3 153 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 DUX4L9Q6RFH8 374 aaPredicted RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 TMEM171Q8WVE6 324 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 GALMQ96C23 342 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 ABHD14AQ9BUJ0 271 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 MBNL3Q9NUK0 354 aaKnown RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 DMRT1Q9Y5R6 373 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 YLPM1P49750 1951 aaKnown RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 IGSF23A1L1A6 192 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 IFITM10A6NMD0 228 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 H0Y980 276 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 CHST1O43916 411 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 RAMP3O60896 148 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 VDAC1P21796 283 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 CEACAM8P31997 349 aaPredicted RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 CCL20P78556 96 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 HAGHQ16775 308 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 HEPN1Q6WQI6 88 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 GPR146Q96CH1 333 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 ABHD14BQ96IU4 210 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
RNF4-201ENST00000314289 GPR137BO60478 399 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 PRDX2P32119 198 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 TDGF1P3P51864 188 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 EWSR1Q01844 656 aaKnown RBP eCLIP10.39□□□□□ -0.756e-6■□□□□ 9.2
RNF4-201ENST00000314289 GCSAMQ8N6F7 178 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 OR10D4PQ8NGN7 298 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 BOD1Q96IK1 185 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 GINS3Q9BRX5 216 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 SFXN3Q9BWM7 321 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 DOK5Q9P104 306 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 WIPI2Q9Y4P8 454 aa10.39□□□□□ -0.75
RNF4-201ENST00000314289 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
RNF4-201ENST00000314289 EDDM3BP56851 147 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 SRPXP78539 464 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 UTF1Q5T230 341 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms