RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 LYRM2Q9NU23 88 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 CISD1Q9NZ45 108 aaKnown RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 IGHV3-21A0A0B4J1V1 117 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 UCP1P25874 307 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 CD1BP29016 333 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TGIF2LYQ8IUE0 185 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TGIF2LXQ8IUE1 241 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 C1orf147Q96MC9 270 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 EP400Q96L91 3159 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 ARHGAP32A7KAX9 2087 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 DOCK6Q96HP0 2047 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 C17orf98A8MV24 154 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TIGITQ495A1 244 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 FAM216BQ8N7L0 139 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TUBG2Q9NRH3 451 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 NCBP2LA6PVI3 153 aaKnown RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 GCSAMQ8N6F7 178 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TRBV6-7A0A0A0MS04 114 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 FAM157AC9JC47 383 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 FHITP49789 147 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF90Q03938 601 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM37Q8WXS4 190 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 SAMD10Q9BYL1 202 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 PITX3O75364 302 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TOX4O94842 621 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 MPZP25189 248 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 GNB2P62879 340 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 H1FOOQ8IZA3 346 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 OR4P4Q8NGL7 312 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF835Q9Y2P0 537 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF503-AS2A6NEH8 195 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 SPOCK3Q9BQ16 436 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 COX7A2P2O60397 106 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 FAM87AP0C7U9 286 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 APELAP0DMC3 54 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 ACSM6Q6P461 480 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 RNF166Q96A37 237 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-201ENST00000314191 HES4Q9HCC6 221 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 KIAA1456Q9P272 454 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 PTBP3O95758 552 aaKnown RBP5.23□□□□□ -1.57
PRKDC-201ENST00000314191 GLRXP35754 106 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 SFXN3Q9BWM7 321 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 CUL9Q8IWT3 2517 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 H3BQ15 152 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 LINC01560Q8TB33 94 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 TIMM23BQ5SRD1 257 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 PEAR1Q5VY43 1037 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-201ENST00000314191 C1orf174Q8IYL3 243 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 CMTM2Q8TAZ6 248 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 CYYR1Q96J86 154 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 RARRES2Q99969 163 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 ABHD14AQ9BUJ0 271 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 TPPP3Q9BW30 176 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 IL19Q9UHD0 177 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 LY86O95711 162 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 RHOVQ96L33 236 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 METRNQ9UJH8 293 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF320A2RRD8 509 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 ORM2P19652 201 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 ANOS1P23352 680 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 TEPPQ6URK8 271 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 DEFA6Q01524 100 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 RPL39P5Q59GN2 51 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 ACP7Q6ZNF0 438 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 DLK1P80370 383 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 BAGE3Q86Y29 109 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 BAGE2Q86Y30 109 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 LDLRAD3Q86YD5 345 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 HARBI1Q96MB7 349 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 CD40P25942 277 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 PLA2G2CQ5R387 149 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 FAM78BQ5VT40 261 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM42Q69YG0 159 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 SLC35E4Q6ICL7 350 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 VKORC1L1Q8N0U8 176 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 CRYBA1P05813 215 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 USB1Q9BQ65 265 aaKnown RBP5.23□□□□□ -1.57
PRKDC-201ENST00000314191 LPAR2Q9HBW0 351 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 TSC2P49815 1807 aa5.23□□□□□ -1.57
PRKDC-201ENST00000314191 PRRX1P54821 245 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 OR8B3Q8NGG8 313 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 LHFPL5Q8TAF8 219 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 OR8B2Q96RD0 313 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 JPT1Q9UK76 154 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 PRNDQ9UKY0 176 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 INSIG2Q9Y5U4 225 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 IQCF6A8MYZ5 107 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 RBP4P02753 201 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 MISP3Q96FF7 219 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 NPVFQ9HCQ7 196 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 COLCA1Q6ZS62 124 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 NEIL1Q96FI4 390 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF714Q96N38 554 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 IDI2-AS1Q9NZ38 188 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TET1Q8NFU7 2136 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 NPY1RP25929 384 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 C1QTNF12Q5T7M4 302 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TAF15Q92804 592 aaKnown RBP eCLIP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM204Q9BSN7 226 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 DVL1O14640 695 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms