RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NEDD8Q15843 81 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 SRSF7Q16629 238 aaKnown RBP eCLIP11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 TPRA1Q86W33 373 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 LGALS14Q8TCE9 139 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 EDARADDQ8WWZ3 215 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 SLC25A38Q96DW6 304 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 KCTD7Q96MP8 289 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 CHCHD6Q9BRQ6 235 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 GHITMQ9H3K2 345 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 ZFP57Q9NU63 452 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 RNF150Q9ULK6 438 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 G3V318 75 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 ATP6V0E1O15342 81 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 RANBP1P43487 201 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 CRIP2P52943 208 aaPredicted RBP11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 SLC35B1P78383 322 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 SSBP2P81877 361 aaPredicted RBP11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 FOXE3Q13461 319 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 KHDC1LQ5JSQ8 128 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 DRAXINQ8NBI3 349 aaPredicted RBP11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 OR5H6Q8NGV6 325 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 OR51J1Q9H342 316 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 DAPK2Q9UIK4 370 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 SSR3Q9UNL2 185 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
PPP1CA-201ENST00000312989 A0A075B6Q4 140 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 TRIM64CA6NLI5 447 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 FCN1O00602 326 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 SSX5O60225 188 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 SOX15O60248 233 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 IGLV1-40P01703 118 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 ELANEP08246 267 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 CD36P16671 472 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 TGFBR1P36897 503 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 SERPINB10P48595 397 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 ZNF260Q3ZCT1 412 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 TEX38Q6PEX7 206 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 RAX2Q96IS3 184 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 DUX3Q96PT4 197 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 KLK15Q9H2R5 256 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 FBXL15Q9H469 300 aa11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.59
PPP1CA-201ENST00000312989 RRHO14718 337 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 HSPA12AO43301 675 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 PF4P02776 101 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 DTYMKP23919 212 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 SLC6A1P30531 599 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 CDX1P47902 265 aaPredicted RBP11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 KIR2DS1Q14954 304 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 HACD4Q5VWC8 232 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 H1FOOQ8IZA3 346 aaPredicted RBP11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 MINDY2Q8NBR6 621 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 KLHL30-AS1Q8NEE0 82 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 YIPF6Q96EC8 236 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 ATG5Q9H1Y0 275 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 SDHAF2Q9NX18 166 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
PPP1CA-201ENST00000312989 METTL21EPA6NDL7 271 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 TMEM235A6NFC5 223 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 BET1O15155 118 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 IGLV2-23P01705 113 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 CD33P20138 364 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 MC5RP33032 325 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 MYCNOSP40205 109 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 CX3CL1P78423 397 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 MXD1Q05195 221 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 EGFEM1PQ0D2K5 195 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 FHL3Q13643 280 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 PSG5Q15238 335 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 MRGPRG-AS1Q2M3A8 158 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 DEFB136Q30KP8 78 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 CDNFQ49AH0 187 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 ASPHD1Q5U4P2 390 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 LIN54Q6MZP7 749 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 NUDCD2Q8WVJ2 157 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 DDB2Q92466 427 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 RCC1LQ96I51 464 aaKnown RBP11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 NECAP2Q9NVZ3 263 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 RHBDL2Q9NX52 303 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 WSB1Q9Y6I7 421 aa11.38□□□□□ -0.59
PPP1CA-201ENST00000312989 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 RBBP9O75884 186 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 TFAP2AP05549 437 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 CRYGBP07316 175 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 OR8U9P0C7N5 309 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 VDAC1P21796 283 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 SCAND1P57086 179 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 OR8U1Q8NH10 309 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 RNF5Q99942 180 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 GON7Q9BXV9 100 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms