RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CASTOR1Q8WTX7 329 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 PHF21AQ96BD5 680 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 CLCC1Q96S66 551 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 S1PR3Q99500 378 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 GINS4Q9BRT9 223 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RANBP3Q9H6Z4 567 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RAB18Q9NP72 206 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 ZNF107Q9UII5 783 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 ANXA10Q9UJ72 324 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 FBXO7Q9Y3I1 522 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 CEPT1Q9Y6K0 416 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 H3BMQ9 156 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RGS11O94810 467 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 DTYMKP23919 212 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 GPR12P47775 334 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 RPL30P62888 115 aaKnown RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 TAGLNQ01995 201 aaKnown RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 NSUN5P1Q3KNT7 163 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 LAX1Q8IWV1 398 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 FAM71E2Q8N5Q1 922 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 FAM110DQ8TAY7 271 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 S100A16Q96FQ6 103 aaKnown RBP9.51□□□□□ -0.89
SCFD1-201ENST00000311943 FBXL15Q9H469 300 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 DIABLOQ9NR28 239 aa9.51□□□□□ -0.89
SCFD1-201ENST00000311943 TNFSF12O43508 249 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 RPL5P46777 297 aaKnown RBP9.5□□□□□ -0.89
SCFD1-201ENST00000311943 ARHGDIBP52566 201 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 NDPQ00604 133 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 KIR2DS1Q14954 304 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 LYSMD2Q8IV50 215 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 OR5AU1Q8NGC0 362 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 ISOC1Q96CN7 298 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 FAM103A1Q9BTL3 118 aaKnown RBP9.5□□□□□ -0.89
SCFD1-201ENST00000311943 RAB9BQ9NP90 201 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 PIPOXQ9P0Z9 390 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 GAB2Q9UQC2 676 aa9.5□□□□□ -0.89
SCFD1-201ENST00000311943 A0A1B0GUS0 222 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 SRRM4A7MD48 611 aaKnown RBP9.49□□□□□ -0.89
SCFD1-201ENST00000311943 G3V318 75 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 H7C2Y5 167 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 PMP2P02689 132 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 ZNF182P17025 639 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-201ENST00000311943 AADACP22760 399 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 PJVKQ0ZLH3 352 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 PNLIPRP3Q17RR3 467 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 LY6G6FQ5SQ64 297 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 HOGA1Q86XE5 327 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 DYNC2LI1Q8TCX1 351 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 ABHD1Q96SE0 405 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 RBM7Q9Y580 266 aaKnown RBP9.49□□□□□ -0.89
SCFD1-201ENST00000311943 HLA-DMAP28067 261 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 FCGR2CP31995 323 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 SCAND1P57086 179 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 BRWD1-AS2P59051 145 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 Q6ZS49 121 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 CENPVQ7Z7K6 275 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-201ENST00000311943 OR5AN1Q8NGI8 311 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 TOLLIPQ9H0E2 274 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 KLK11Q9UBX7 282 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 WSB1Q9Y6I7 421 aa9.49□□□□□ -0.89
SCFD1-201ENST00000311943 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-201ENST00000311943 FAM25AB3EWG3 89 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 FAM25CB3EWG5 89 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 FAM25GB3EWG6 89 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 FXYD4P59646 89 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 IDO2Q6ZQW0 420 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 BVESQ8NE79 360 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 EDARADDQ8WWZ3 215 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 DCUN1D5Q9BTE7 237 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 EXTL2Q9UBQ6 330 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 ZNF221Q9UK13 617 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 MGAT4AQ9UM21 535 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 TUSC2O75896 110 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 IGHG2P01859 326 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 SSBP2P81877 361 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-201ENST00000311943 CNIH2Q6PI25 160 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 C16orf82Q7Z2V1 217 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 SLC35E3Q7Z769 313 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 VKORC1L1Q8N0U8 176 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 AKR1E2Q96JD6 320 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 RBM38Q9H0Z9 239 aaKnown RBP9.48□□□□□ -0.89
SCFD1-201ENST00000311943 TAS2R8Q9NYW2 309 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 OR2W1Q9Y3N9 320 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 A3GALT2U3KPV4 340 aa9.48□□□□□ -0.89
SCFD1-201ENST00000311943 IGHV7-81A0A0B4J1V7 117 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 ATP6V0E1O15342 81 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 RGS5O15539 181 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 FBXO24O75426 580 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 APOA1P02647 267 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 APELAP0DMC3 54 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 DUTP33316 252 aaKnown RBP9.47□□□□□ -0.89
SCFD1-201ENST00000311943 ARPC4P59998 168 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 PITPNAQ00169 270 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 SRSF7Q16629 238 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCFD1-201ENST00000311943 MRGPRG-AS1Q2M3A8 158 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 TMEM17Q86X19 198 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms