RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 F5H0A9 414 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 PITX3O75364 302 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 SELLP14151 372 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 PVALBP20472 110 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 RPL12P30050 165 aaKnown RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 NKX2-1P43699 371 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 ID3Q02535 119 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 ZNF585BQ52M93 769 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 OXLD1Q5BKU9 147 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 FAM219AQ8IW50 185 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 FAM216BQ8N7L0 139 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 CD300LFQ8TDQ1 290 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 ITLN2Q8WWU7 325 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 CCL17Q92583 94 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 C5orf30Q96GV9 206 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 GPHA2Q96T91 129 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 ZNF471Q9BX82 626 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 GFOD1Q9NXC2 390 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 IDI2-AS1Q9NZ38 188 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
TPM3-202ENST00000302206 AUP1Q9Y679 476 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 HCFC1P51610 2035 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 CSMD2Q7Z408 3487 aa9.93□□□□□ -0.82
TPM3-202ENST00000302206 RAI1Q7Z5J4 1906 aaPredicted RBP9.92□□□□□ -0.82
TPM3-202ENST00000302206 A0A1B0GW55 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 TMPRSS2O15393 492 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 GPR137BO60478 399 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 SCGB1D2O95969 90 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 IGKV1-39P01597 117 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
TPM3-202ENST00000302206 IGKV1D-39P04432 117 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L2P0CJ85 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L3P0CJ86 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L4P0CJ87 422 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L5P0CJ88 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L6P0CJ89 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L7P0CJ90 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 TPT1P13693 172 aaKnown RBP9.92□□□□□ -0.82
TPM3-202ENST00000302206 MRPS11P82912 194 aaKnown RBP9.92□□□□□ -0.82
TPM3-202ENST00000302206 HFEQ30201 348 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 Q3ZCU0 254 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4L9Q6RFH8 374 aaPredicted RBP9.92□□□□□ -0.82
TPM3-202ENST00000302206 TCF23Q7RTU1 214 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DMBX1Q8NFW5 382 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 GPR146Q96CH1 333 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 GAL3ST2Q9H3Q3 398 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 CBLN4Q9NTU7 201 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 MED9Q9NWA0 146 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 SDHAF2Q9NX18 166 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 COA4Q9NYJ1 87 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DUX4Q9UBX2 424 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 RNF150Q9ULK6 438 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 PSG11Q9UQ72 335 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 LAMP3Q9UQV4 416 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 DSCAMO60469 2012 aa9.92□□□□□ -0.82
TPM3-202ENST00000302206 ADGRG4Q8IZF6 3080 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 IGHV3-43A0A0B4J1X8 118 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 NDUFB3O43676 98 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 SPDEFO95238 335 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 IGHV3-43DP0DP04 118 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 KIR2DS2P43631 304 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 LPAR6P43657 344 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 GPR12P47775 334 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
TPM3-202ENST00000302206 LRRC10Q5BKY1 277 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 FAM53AQ6NSI3 398 aaPredicted RBP9.91□□□□□ -0.82
TPM3-202ENST00000302206 FOXRED2Q8IWF2 684 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 ZNF439Q8NDP4 499 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 NEU4Q8WWR8 484 aaPredicted RBP9.91□□□□□ -0.82
TPM3-202ENST00000302206 RAB1BQ9H0U4 201 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 SLC25A32Q9H2D1 315 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 RPUSD1Q9UJJ7 312 aaKnown RBP9.91□□□□□ -0.82
TPM3-202ENST00000302206 RCL1Q9Y2P8 373 aaKnown RBP9.91□□□□□ -0.82
TPM3-202ENST00000302206 MMP24Q9Y5R2 645 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 PCNX1Q96RV3 2341 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 CELSR1Q9NYQ6 3014 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 APCP25054 2843 aa9.91□□□□□ -0.82
TPM3-202ENST00000302206 MED13LQ71F56 2210 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 A0A0G2JRQ6 117 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 RBFOX2O43251 390 aaKnown RBP eCLIP9.9□□□□□ -0.82
TPM3-202ENST00000302206 ZG16O60844 167 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 GOSR1O95249 250 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 IGKV1-5P01602 117 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 P0C879 139 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 NDUFB7P17568 137 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 ARHGDIBP52566 201 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 KIAA2026Q5HYC2 2103 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 C11orf71Q6IPW1 123 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 ALKAL2Q6UX46 152 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 DTX2Q86UW9 622 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 BAP18Q8IXM2 172 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 RNASE11Q8TAA1 199 aaKnown RBP9.9□□□□□ -0.82
TPM3-202ENST00000302206 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 ABHD14AQ9BUJ0 271 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 IFI27L2Q9H2X8 130 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms