RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PHYHIPLQ96FC7 376 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 HSD17B10Q99714 261 aaKnown RBP18.39■□□□□ 0.53
SMAD1-201ENST00000302085 CTSZQ9UBR2 303 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 ABCA4P78363 2273 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 ITGB1BP1O14713 200 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 TAAR5O14804 337 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 NXPH3O95157 252 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 PPOXP50336 477 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 TMEM33P57088 247 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 MEF2CQ06413 473 aaPredicted RBP18.39■□□□□ 0.53
SMAD1-201ENST00000302085 CT45A1Q5HYN5 189 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 FAM74A1Q5RGS3 127 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 SPAG16Q8N0X2 631 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 CT45A3Q8NHU0 189 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 CACNG5Q9UF02 275 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 LINC00312Q9Y6C7 94 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 USF3Q68DE3 2245 aa18.39■□□□□ 0.53
SMAD1-201ENST00000302085 KALRNO60229 2985 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 ACACBO00763 2458 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 B8ZZF3 427 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 NDUFB3O43676 98 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 TPT1P13693 172 aaKnown RBP18.38■□□□□ 0.53
SMAD1-201ENST00000302085 AKR1C2P52895 323 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 ZNF816Q0VGE8 651 aaPredicted RBP18.38■□□□□ 0.53
SMAD1-201ENST00000302085 ZNF273Q14593 569 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 BAP18Q8IXM2 172 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 CITED4Q96RK1 184 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 TAS2R3Q9NYW6 316 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 KAAG1Q9UBP8 84 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 FBXL17Q9UF56 701 aa18.38■□□□□ 0.53
SMAD1-201ENST00000302085 SSSCA1O60232 199 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 NFYBP25208 207 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 DUTP33316 252 aaKnown RBP18.37■□□□□ 0.53
SMAD1-201ENST00000302085 RPL31P62899 125 aaKnown RBP18.37■□□□□ 0.53
SMAD1-201ENST00000302085 RPL39P5Q59GN2 51 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 NCR3LG1Q68D85 454 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 RPL7L1Q6DKI1 246 aaKnown RBP18.37■□□□□ 0.53
SMAD1-201ENST00000302085 C1orf229Q6ZS94 237 aaPredicted RBP18.37■□□□□ 0.53
SMAD1-201ENST00000302085 TCTEX1D1Q8N7M0 179 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 FAM212BQ9NTI7 297 aaPredicted RBP18.37■□□□□ 0.53
SMAD1-201ENST00000302085 A0A1W2PPE3 182 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 TMEM50AO95807 157 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 PRAMEF5Q5TYX0 476 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 TMEM200BQ69YZ2 307 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 ZNF439Q8NDP4 499 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 SMIM3Q9BZL3 60 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 SLC25A32Q9H2D1 315 aa18.37■□□□□ 0.53
SMAD1-201ENST00000302085 FAM24AA6NFZ4 105 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 DVL1O14640 695 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 CHST1O43916 411 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 S1PR2O95136 353 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 LRRC10Q5BKY1 277 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 CXorf58Q96LI9 332 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 FAM210AQ96ND0 272 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 ABHD14AQ9BUJ0 271 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 CBLN4Q9NTU7 201 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 RPUSD1Q9UJJ7 312 aaKnown RBP18.36■□□□□ 0.53
SMAD1-201ENST00000302085 GAB2Q9UQC2 676 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 MMP24Q9Y5R2 645 aa18.36■□□□□ 0.53
SMAD1-201ENST00000302085 ANKRD34BA5PLL1 514 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 NDUFA2O43678 99 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 P0C879 139 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 RAB7AP51149 207 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 ERVFRD-1P60508 538 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 NHLH2Q02577 135 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 C11orf71Q6IPW1 123 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 WFDC1Q9HC57 220 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 SPTBN1Q01082 2364 aaKnown RBP18.35■□□□□ 0.53
SMAD1-201ENST00000302085 M0R1X1 148 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 KRASP01116 189 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 MMP9P14780 707 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 PVALBP20472 110 aaPredicted RBP18.35■□□□□ 0.53
SMAD1-201ENST00000302085 G6PCP35575 357 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 COMMD7Q86VX2 200 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 OR2C3Q8N628 320 aa18.35■□□□□ 0.53
SMAD1-201ENST00000302085 C19orf84I3L1E1 186 aa18.34■□□□□ 0.53
SMAD1-201ENST00000302085 SOD3P08294 240 aa18.34■□□□□ 0.53
SMAD1-201ENST00000302085 PAX9P55771 341 aa18.34■□□□□ 0.53
SMAD1-201ENST00000302085 TMEM30BQ3MIR4 351 aa18.34■□□□□ 0.53
SMAD1-201ENST00000302085 H1FXQ92522 213 aaKnown RBP18.34■□□□□ 0.53
SMAD1-201ENST00000302085 SMG1Q96Q15 3661 aaKnown RBP18.33■□□□□ 0.53
SMAD1-201ENST00000302085 A0A1W2PPR1 153 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 IGSF23A1L1A6 192 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 RRASP10301 218 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 CCL3L1P16619 93 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 VAMP2P63027 116 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 ODF3L1Q8IXM7 274 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 PDZD9Q8IXQ8 264 aa18.33■□□□□ 0.53
SMAD1-201ENST00000302085 LYRM2Q9NU23 88 aaPredicted RBP18.33■□□□□ 0.53
SMAD1-201ENST00000302085 GAPDHP04406 335 aaKnown RBP18.33■□□□□ 0.52
SMAD1-201ENST00000302085 EWSR1Q01844 656 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMAD1-201ENST00000302085 ZNF295-AS1Q8N0V1 137 aa18.33■□□□□ 0.52
SMAD1-201ENST00000302085 OR10A7Q8NGE5 316 aa18.33■□□□□ 0.52
SMAD1-201ENST00000302085 RAB1BQ9H0U4 201 aa18.33■□□□□ 0.52
SMAD1-201ENST00000302085 GAL3ST2Q9H3Q3 398 aa18.33■□□□□ 0.52
SMAD1-201ENST00000302085 YLPM1P49750 1951 aaKnown RBP18.32■□□□□ 0.52
SMAD1-201ENST00000302085 WRBO00258 174 aa18.32■□□□□ 0.52
SMAD1-201ENST00000302085 DANCRP0C864 163 aa18.32■□□□□ 0.52
SMAD1-201ENST00000302085 CAV2P51636 162 aa18.32■□□□□ 0.52
SMAD1-201ENST00000302085 ZNF714Q96N38 554 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms