RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SRP19P09132 144 aaKnown RBP11.35□□□□□ -0.59
CASC4-201ENST00000299957 FOXO1Q12778 655 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 C10orf128Q5T292 105 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 FAM53AQ6NSI3 398 aaPredicted RBP11.35□□□□□ -0.59
CASC4-201ENST00000299957 PPP1R32Q7Z5V6 425 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 BLNKQ8WV28 456 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 C1orf147Q96MC9 270 aaPredicted RBP11.35□□□□□ -0.59
CASC4-201ENST00000299957 TECTBQ96PL2 329 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 TMEM147Q9BVK8 224 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 IER3P46695 156 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 MOGAT3Q86VF5 341 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 SIGLECL1Q8N7X8 197 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 CHD9Q3L8U1 2897 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 ZGRF1Q86YA3 2104 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 A0A1B0GU03 582 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 PTGDSP41222 190 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 TMEM105Q8N8V8 129 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 NHLRC2Q8NBF2 726 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 GALNT14Q96FL9 552 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 CIB3Q96Q77 187 aaPredicted RBP11.34□□□□□ -0.59
CASC4-201ENST00000299957 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
CASC4-201ENST00000299957 COMMD5Q9GZQ3 224 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 WDR54Q9H977 334 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 NPIPB13A6NJU9 1138 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 DBX1A6NMT0 343 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 NPIPB4C9JG80 1138 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 CD33P20138 364 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 TCTAP57738 103 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 TMEM54Q969K7 222 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 DAZAP1Q96EP5 407 aaKnown RBP11.34□□□□□ -0.59
CASC4-201ENST00000299957 GINS3Q9BRX5 216 aa11.34□□□□□ -0.59
CASC4-201ENST00000299957 CD5P06127 495 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 STUMQ69YW2 141 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 FAM216AQ8WUB2 273 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 BORCS7Q96B45 105 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 TGOLN2O43493 480 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 PTBP3O95758 552 aaKnown RBP11.33□□□□□ -0.6
CASC4-201ENST00000299957 MBP02144 154 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 TNFSF4P23510 183 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 GCSAMLQ5JQS6 135 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 FBXW9Q5XUX1 488 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 VN1R17PQ8TDU5 208 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 NABP1Q96AH0 204 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 ELOVL1Q9BW60 279 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 ZNF331Q9NQX6 463 aaPredicted RBP11.33□□□□□ -0.6
CASC4-201ENST00000299957 H0Y980 276 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 CDX1P47902 265 aaPredicted RBP11.33□□□□□ -0.6
CASC4-201ENST00000299957 PSG5Q15238 335 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 H1FOOQ8IZA3 346 aaPredicted RBP11.33□□□□□ -0.6
CASC4-201ENST00000299957 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 CCL17Q92583 94 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 IMMP1LQ96LU5 166 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 PARLQ9H300 379 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 PROCRQ9UNN8 238 aa11.33□□□□□ -0.6
CASC4-201ENST00000299957 NKX2-8O15522 239 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
CASC4-201ENST00000299957 AMTP48728 403 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 RNPS1Q15287 305 aaKnown RBP11.32□□□□□ -0.6
CASC4-201ENST00000299957 CBLN4Q9NTU7 201 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 VSTM5A8MXK1 200 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 FGF5P12034 268 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 COL10A1Q03692 680 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 TFF3Q07654 80 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
CASC4-201ENST00000299957 FOXJ2Q9P0K8 574 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 RAMP3O60896 148 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 FXYD3Q14802 87 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 ZNRF1Q8ND25 227 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
CASC4-201ENST00000299957 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 TRBV6-7A0A0A0MS04 114 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 A0A0G2JRQ6 117 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 B2MP61769 119 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 RNF151Q2KHN1 245 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 METTL1Q9UBP6 276 aaKnown RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 LAMA1P25391 3075 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 SPAARA0A1B0GVQ0 90 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 C1QTNF9BB2RNN3 333 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 H3BTX0 84 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 IGLV3-19P01714 112 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 NTF4P34130 210 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 WNT5AP41221 380 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 PNRC1Q12796 327 aaPredicted RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 DEFB124Q8NES8 71 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 OR5B3Q8NH48 314 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 CSPG4Q6UVK1 2322 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 PQLC2LA1A4F0 135 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms