RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CTRB2Q6GPI1 263 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 FAM122CQ6P4D5 195 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 DEFB108BQ8NET1 73 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 ITLN1Q8WWA0 313 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 RBKSQ9H477 322 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 RPRMQ9NS64 109 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 LIN7CQ9NUP9 197 aaKnown RBP9.81□□□□□ -0.84
RHO-201ENST00000296271 A0A1W2PPE2 198 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 ODAMA1E959 279 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 C15orf65H3BRN8 121 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 H7C2Y5 167 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 ZNF134P52741 427 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 P2RY6Q15077 328 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 NCR3LG1Q68D85 454 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 FIP1L1Q6UN15 594 aaKnown RBP9.81□□□□□ -0.84
RHO-201ENST00000296271 BEND4Q6ZU67 534 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 SSX9Q7RTT3 188 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 STX12Q86Y82 276 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 ZNF525Q8N782 197 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
RHO-201ENST00000296271 AGMATQ9BSE5 352 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
RHO-201ENST00000296271 PTPRQQ9UMZ3 2332 aa9.81□□□□□ -0.84
RHO-201ENST00000296271 A0A1W2PPH5 198 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 SLC31A2O15432 143 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 ZG16O60844 167 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 CLDN1O95832 211 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
RHO-201ENST00000296271 ELLP55199 621 aaPredicted RBP9.8□□□□□ -0.84
RHO-201ENST00000296271 EDDM3BP56851 147 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 UBE2KP61086 200 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 SMIM21Q3B7S5 101 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 RPL39P5Q59GN2 51 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 LCN15Q6UWW0 184 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 OR4C12Q96R67 309 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 MLXQ9UH92 298 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 TPRP12270 2363 aaKnown RBP9.8□□□□□ -0.84
RHO-201ENST00000296271 RBFOX3A6NFN3 312 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 ZNF727A8MUV8 499 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 TAS2R30P59541 319 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 OR2B8PP59922 312 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 AKR1C8PQ5T2L2 129 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 NINJ1Q92982 152 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 RAB40CQ96S21 281 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 MRPL37Q9BZE1 423 aaKnown RBP9.8□□□□□ -0.84
RHO-201ENST00000296271 ZNRD1Q9P1U0 126 aa9.8□□□□□ -0.84
RHO-201ENST00000296271 TET2Q6N021 2002 aaPredicted RBP9.8□□□□□ -0.84
RHO-201ENST00000296271 UBE2L5PA0A1B0GUS4 154 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 CEACAM1P13688 526 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 RAB5CP51148 216 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 BAXQ07812 192 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
RHO-201ENST00000296271 SP5Q6BEB4 398 aaPredicted RBP9.79□□□□□ -0.84
RHO-201ENST00000296271 SLC35B3Q9H1N7 401 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 KPTNQ9Y664 436 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 WSB1Q9Y6I7 421 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 TNCP24821 2201 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 SPTBN4Q9H254 2564 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 RAI1Q7Z5J4 1906 aaPredicted RBP9.79□□□□□ -0.84
RHO-201ENST00000296271 hCG_1809904A0A1W2PP81 198 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 A0A1W2PR64 198 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 A0A1W2PRV1 198 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 SRRM5B3KS81 715 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 CYB5R3P00387 301 aaPredicted RBP9.79□□□□□ -0.84
RHO-201ENST00000296271 IGKV1D-33P01593 117 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 IGKV1-33P01594 117 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 ACAA1P09110 424 aaPredicted RBP9.79□□□□□ -0.84
RHO-201ENST00000296271 CCKARP32238 428 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 TNFRSF9Q07011 255 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 ICAM4Q14773 271 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 RTP5Q14D33 572 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 C1orf185Q5T7R7 199 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 IGF2-ASQ6U949 168 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 IGFL3Q6UXB1 125 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 CISD2Q8N5K1 135 aaKnown RBP9.79□□□□□ -0.84
RHO-201ENST00000296271 CYB561D1Q8N8Q1 229 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 Q8TCH9 128 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 ZNF665Q9H7R5 613 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 NDRG3Q9UGV2 375 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 MMP24Q9Y5R2 645 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 CSMD1Q96PZ7 3565 aa9.79□□□□□ -0.84
RHO-201ENST00000296271 RBMXL2O75526 392 aaKnown RBP9.78□□□□□ -0.84
RHO-201ENST00000296271 TSPAN9O75954 239 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 CRYAAP02489 173 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 MMP9P14780 707 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 ABHD17AQ96GS6 310 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 MEGF10Q96KG7 1140 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 PRELID1Q9Y255 219 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 TRAV3A0A0B4J244 114 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 ZFP92A6NM28 416 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 P0C879 139 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 SLC25A6P12236 298 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 EIF2S3P41091 472 aaKnown RBP9.78□□□□□ -0.84
RHO-201ENST00000296271 RPL35P42766 123 aaKnown RBP9.78□□□□□ -0.84
RHO-201ENST00000296271 NKX6-1P78426 367 aaPredicted RBP9.78□□□□□ -0.84
RHO-201ENST00000296271 FAM24BQ8N5W8 94 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms