RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 LHX2P50458 406 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 ZNF766Q5HY98 468 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 C12orf49Q9H741 205 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 C5orf49A4QMS7 147 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 NPIPB15A6NHN6 443 aaPredicted RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 TAX1BP3O14907 124 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM50BP56557 158 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 EIF3IQ13347 325 aaKnown RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 CTSBP07858 339 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 EVI2AP22794 236 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 C8orf86Q6ZUL3 223 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 MRGPREQ86SM8 312 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 NPVFQ9HCQ7 196 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 RAB9BQ9NP90 201 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 KLF12Q9Y4X4 402 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 MED1Q15648 1581 aaPredicted RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 AFDNP55196 1824 aaKnown RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 TRBV5-5A0A0J9YX44 114 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 CRYM-AS1A6NIL9 109 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 DUX4L9Q6RFH8 374 aaPredicted RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 TBC1D26Q86UD7 250 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 PBOV1Q9GZY1 135 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 PNRC2Q9NPJ4 139 aaKnown RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 DENND4AQ7Z401 1863 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 CRYBA2P53672 197 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 PSG6Q00889 435 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 FAM90A2PQ658T7 463 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM25Q86YD3 366 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 MKXQ8IYA7 352 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 CFIP05156 583 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 MFAP5Q13361 173 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 CDKN3Q16667 212 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 STRCP1A6NGW2 1772 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 AHDC1Q5TGY3 1603 aaPredicted RBP10.13□□□□□ -0.79
SNIP1-201ENST00000296215 hADV38S2A0JD32 116 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 FAM78AQ5JUQ0 283 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 SFTA2Q6UW10 78 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 OR13H1Q8NG92 308 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 PHPT1Q9NRX4 125 aaPredicted RBP10.13□□□□□ -0.79
SNIP1-201ENST00000296215 FOXH1O75593 365 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 OR2J3O76001 311 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 RHOGP84095 191 aa10.13□□□□□ -0.79
SNIP1-201ENST00000296215 ZNF816Q0VGE8 651 aaPredicted RBP10.13□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 FAM110AQ9BQ89 295 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 MMP17Q9ULZ9 603 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 SERINC4A6NH21 518 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 ATP5LO75964 103 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 POU3F1Q03052 451 aaPredicted RBP10.12□□□□□ -0.79
SNIP1-201ENST00000296215 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
SNIP1-201ENST00000296215 SLC48A1Q6P1K1 146 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 BCL6BQ8N143 479 aaPredicted RBP10.12□□□□□ -0.79
SNIP1-201ENST00000296215 NRXN3Q9Y4C0 1643 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 TRAV8-4A0A0B4J246 113 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 RPL27P61353 136 aaKnown RBP10.12□□□□□ -0.79
SNIP1-201ENST00000296215 GNG5P63218 68 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 RPL18Q07020 188 aaKnown RBP10.12□□□□□ -0.79
SNIP1-201ENST00000296215 ABHD14BQ96IU4 210 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 AP5S1Q9NUS5 200 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 R4GN57 208 aa10.12□□□□□ -0.79
SNIP1-201ENST00000296215 J3KT08 172 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 CD38P28907 300 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 Q0VG73 95 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 OR2I1PQ8NGU4 316 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 PIGCQ92535 297 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 ARPC1AQ92747 370 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 NDFIP1Q9BT67 221 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 EDA2RQ9HAV5 297 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 DUSP13Q9UII6 198 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 PIGLQ9Y2B2 252 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 SCN8AQ9UQD0 1980 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 RPS15AP62244 130 aaKnown RBP10.11□□□□□ -0.79
SNIP1-201ENST00000296215 BMFQ96LC9 184 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 DEFB118Q96PH6 123 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM167BQ9NRX6 74 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 hCG_38984A0A1B0GV85 526 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 SHISA8B8ZZ34 492 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 H7C2G1 150 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 TIAF1O95411 115 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 ZGLP1P0C6A0 271 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 PQLC2Q6ZP29 291 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 ZADH2Q8N4Q0 377 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 ZNF414Q96IQ9 312 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 B4GALNT1Q00973 533 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 LRTM2Q8N967 370 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 RPEQ96AT9 228 aa10.11□□□□□ -0.79
SNIP1-201ENST00000296215 A0A1W2PS18 150 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 PRDX4Q13162 271 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 GUSBP1Q15486 140 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 NEUROG3Q9Y4Z2 214 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 LRRC30A6NM36 301 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 F2RL2O00254 374 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 SLC23A3Q6PIS1 610 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 TCF24Q7RTU0 167 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms