RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 OR5H1A6NKK0 313 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 FTH1P19P0C7X4 201 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 NQO2P16083 231 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 TVP23CQ96ET8 276 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 ASCL3Q9NQ33 180 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 AQP7O14520 342 aa16.69■□□□□ 0.26
SCUBE1-201ENST00000290460 ALKBH2Q6NS38 261 aa16.69■□□□□ 0.26
SCUBE1-201ENST00000290460 ZNF610Q8N9Z0 462 aa16.69■□□□□ 0.26
SCUBE1-201ENST00000290460 MALSU1Q96EH3 234 aa16.69■□□□□ 0.26
SCUBE1-201ENST00000290460 HSPB7Q9UBY9 170 aa16.69■□□□□ 0.26
SCUBE1-201ENST00000290460 BCL2P10415 239 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 RPS10P46783 165 aaKnown RBP16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 LTC4SQ16873 150 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 FAM90A2PQ658T7 463 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 TMEM14EPQ6UXP3 125 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 SLC16A13Q7RTY0 426 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 Q8WTZ3 238 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 TAF15Q92804 592 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 ZDHHC16Q969W1 377 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 PLPPR2Q96GM1 343 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 ST8SIA5O15466 376 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 IGHV2-5P01817 119 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 P0C879 139 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 CD82P27701 267 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 MAS1LP35410 378 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 ERVFRD-1P60508 538 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 BEND4Q6ZU67 534 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 PIP4P1Q86T03 277 aa16.68■□□□□ 0.26
SCUBE1-201ENST00000290460 TRAV17A0A0B4J275 112 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 IGHV2OR16-5A0A0B4J2B6 119 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 IGHV1-18A0A0C4DH31 117 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 LRRC30A6NM36 301 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 LINC00473A8K010 186 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 PRR33A8MZF0 331 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 FAM90A26D6RGX4 464 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 IGKV1D-33P01593 117 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 IGKV1-33P01594 117 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 CXCL1P09341 107 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 OR8U8P0C7N1 319 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 KITLGP21583 273 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 TLE1Q04724 770 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 EDDM3AQ14507 147 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 ELOBQ15370 118 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 ACSF3Q4G176 576 aaPredicted RBP16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 ZBTB34Q8NCN2 500 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 MBD3L1Q8WWY6 194 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 ZG16O60844 167 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 HOXB1P14653 301 aaPredicted RBP16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 GCH1P30793 250 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 SERF2P84101 59 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 CATR1Q13166 79 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 TMEM41BQ5BJD5 291 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 IGFL2Q6UWQ7 119 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 CD177Q8N6Q3 437 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 C1orf162Q8NEQ5 155 aaPredicted RBP16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 SARAFQ96BY9 339 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 PARD6AQ9NPB6 346 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 CISD1Q9NZ45 108 aaKnown RBP16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 METTL1Q9UBP6 276 aaKnown RBP16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 PSG11Q9UQ72 335 aa16.67■□□□□ 0.26
SCUBE1-201ENST00000290460 HMGB3O15347 200 aaKnown RBP16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 TNFSF13O75888 250 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 MSMO1Q15800 293 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 SMIM21Q3B7S5 101 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 ZNF718Q3SXZ3 478 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 Q3ZCU0 254 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 PRR7Q8TB68 274 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 LRRC29Q8WV35 223 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 DKK4Q9UBT3 224 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 MAP1BP46821 2468 aaKnown RBP16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 A0A087WWC5 75 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 MAP1LC3B2A6NCE7 125 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 DEFB109BQ30KR1 87 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 SLC35E3Q7Z769 313 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 RPP25LQ8N5L8 163 aaKnown RBP16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 NANPQ8TBE9 248 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 TAAR6Q96RI8 345 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 MAP1LC3BQ9GZQ8 125 aa16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 SMG1Q96Q15 3661 aaKnown RBP16.66■□□□□ 0.26
SCUBE1-201ENST00000290460 TGIF2-C20orf24A0A0A6YYL0 155 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 RBMXL2O75526 392 aaKnown RBP16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 IGLV1-44P01699 117 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 EGR1P18146 543 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 MSMPQ1L6U9 139 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 OR2Z1Q8NG97 314 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 CA5BP1Q8WTZ4 195 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 PLSCR4Q9NRQ2 329 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 CEP250Q9BV73 2442 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 ACSM6Q6P461 480 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 LRP11Q86VZ4 500 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 STARD4Q96DR4 205 aa16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 ZNF71Q9NQZ8 489 aaPredicted RBP16.65■□□□□ 0.26
SCUBE1-201ENST00000290460 CEBPZOSA8MTT3 80 aa16.64■□□□□ 0.25
SCUBE1-201ENST00000290460 IFNA17P01571 189 aa16.64■□□□□ 0.25
SCUBE1-201ENST00000290460 NCMAPQ5T1S8 102 aa16.64■□□□□ 0.25
SCUBE1-201ENST00000290460 OR10G4Q8NGN3 311 aa16.64■□□□□ 0.25
SCUBE1-201ENST00000290460 DTD1Q8TEA8 209 aa16.64■□□□□ 0.25
SCUBE1-201ENST00000290460 AP4M1O00189 453 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms