RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 OR4C12Q96R67 309 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 MAP1BP46821 2468 aaKnown RBP15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 RNF224P0DH78 156 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 SPATA46Q5T0L3 261 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 SLX1AQ9BQ83 275 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 GNB4Q9HAV0 340 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 DNAJC4Q9NNZ3 241 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 AMMECR1Q9Y4X0 333 aaPredicted RBP15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 SEC16AO15027 2179 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 COLCA2A8K830 154 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 LINC00869P0C866 280 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 TMEM11P17152 192 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 KLF3P57682 345 aaPredicted RBP15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 FHL5Q5TD97 284 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 BIVMQ86UB2 503 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 C2orf88Q9BSF0 95 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 SH3BGRL3Q9H299 93 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 CCL4P13236 92 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 MDKP21741 143 aaPredicted RBP15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 ACP1P24666 158 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 CTAG1AP78358 180 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 HEPN1Q6WQI6 88 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 GDF15Q99988 308 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 TM2D1Q9BX74 207 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 OR2J1Q9GZK6 312 aa15.14■□□□□ 0.01
PCDHA13-201ENST00000289272 MRPS11P82912 194 aaKnown RBP15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 GAB4Q2WGN9 574 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 PDCD11Q14690 1871 aaKnown RBP15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 DPRXA6NFQ7 191 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 PGLYRP1O75594 196 aaPredicted RBP15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 DMRTA1Q5VZB9 504 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 SLC25A47Q6Q0C1 308 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 SCARF2Q96GP6 870 aaPredicted RBP15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 FGF5P12034 268 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 S100A4P26447 101 aaKnown RBP15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 OR8I2Q8N0Y5 310 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 RBKSQ9H477 322 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 A0A0G2JMZ2 1700 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 LRRC37A2A6NM11 1700 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 OR2J3O76001 311 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 ZNF645Q8N7E2 425 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 OR2Z1Q8NG97 314 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 IMMP2LQ96T52 175 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
PCDHA13-201ENST00000289272 KLF7O75840 302 aaPredicted RBP15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 GNB2P62879 340 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 MGAT2Q10469 447 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 MRGPRDQ8TDS7 321 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 Q8WTZ3 238 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SMOC1Q9H4F8 434 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SOX21Q9Y651 276 aaPredicted RBP15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 TNFRSF9Q07011 255 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 NIT1Q86X76 327 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 OR52M1Q8NGK5 317 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 CLDND2Q8NHS1 167 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 GPR146Q96CH1 333 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 CLN8Q9UBY8 286 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SOD3P08294 240 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 ZNF83P51522 516 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 CEACAM21Q3KPI0 293 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 OR2M3Q8NG83 312 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 CTHRC1Q96CG8 243 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 ZNF785A8K8V0 405 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SPRY3O43610 288 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SYNGR1O43759 233 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 PSMB2P49721 201 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SCGB1D4Q6XE38 83 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 SSMEM1Q8WWF3 244 aa15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 ZNF501Q96CX3 271 aaPredicted RBP15.12■□□□□ 0.01
PCDHA13-201ENST00000289272 PATE4P0C8F1 98 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 GBGT1Q8N5D6 347 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 LRRC75AQ8NAA5 344 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 MISP3Q96FF7 219 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 HDHD3Q9BSH5 251 aaPredicted RBP15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 PAXXQ9BUH6 204 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 PLSCR2Q9NRY7 297 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 S1PR2O95136 353 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 CSN3P07498 182 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 SOX8P57073 446 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 COL10A1Q03692 680 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 KHDC1LQ5JSQ8 128 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 DCAF10Q5QP82 559 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 LY6G6FQ5SQ64 297 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 MRPL32Q9BYC8 188 aaKnown RBP15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 IL36BQ9NZH7 164 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 RBP4P02753 201 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 LIPFP07098 398 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 CXorf66Q5JRM2 361 aaPredicted RBP15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 MMD2Q8IY49 270 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 J3QRE1 110 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 CLDN14O95500 239 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 TMEM136Q6ZRR5 245 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 RAB1BQ9H0U4 201 aa15.11■□□□□ 0.01
PCDHA13-201ENST00000289272 TRBV6-7A0A0A0MS04 114 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 TSPAN2O60636 221 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 LRRC29Q8WV35 223 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 PKIBQ9C010 78 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 ID4P47928 161 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 SRSF4Q08170 494 aaKnown RBP15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 BHLHA15Q7RTS1 189 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms