RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 TOLLIPQ9H0E2 274 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 KCNK15Q9H427 330 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 SLA2Q9H6Q3 261 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 AK3Q9UIJ7 227 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 DNAH9Q9NYC9 4486 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 IGHV4OR15-8A0A075B7B6 117 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 A0A087WW49 117 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 C13orf42A0A1B0GVH6 325 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 TMEM14DPA8MWL7 114 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 SPDEFO95238 335 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 CNIH1O95406 144 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 TRGV3P03979 118 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 HSPB1P04792 205 aaKnown RBP10.87□□□□□ -0.67
TPM1-202ENST00000288398 TFAP2AP05549 437 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 HSMCR30P0CW71 290 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 GP9P14770 177 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 CRIP2P52943 208 aaPredicted RBP10.87□□□□□ -0.67
TPM1-202ENST00000288398 TRAM1Q15629 374 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 RAB11BQ15907 218 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 AKIRIN2Q53H80 203 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 OGFRL1Q5TC84 451 aaPredicted RBP10.87□□□□□ -0.67
TPM1-202ENST00000288398 LIPKQ5VXJ0 399 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 RNLSQ5VYX0 342 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 LAIR2Q6ISS4 152 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 CD200R1LQ6Q8B3 271 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 LFNGQ8NES3 379 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 FBLIM1Q8WUP2 373 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 CYYR1Q96J86 154 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 CMSS1Q9BQ75 279 aaKnown RBP10.87□□□□□ -0.67
TPM1-202ENST00000288398 FAM103A1Q9BTL3 118 aaKnown RBP10.87□□□□□ -0.67
TPM1-202ENST00000288398 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 C11orf54Q9H0W9 315 aaPredicted RBP10.87□□□□□ -0.67
TPM1-202ENST00000288398 PALMDQ9NP74 551 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 FKBP14Q9NWM8 211 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 OR1A1Q9P1Q5 309 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 TPRKBQ9Y3C4 175 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 FBXO7Q9Y3I1 522 aa10.87□□□□□ -0.67
TPM1-202ENST00000288398 TRBV6-6A0A0A6YYG2 114 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 SOCS1O15524 211 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 CA2P00918 260 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 UCHL1P09936 223 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 SPNP16150 400 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 PSMA1P25786 263 aaKnown RBP10.86□□□□□ -0.67
TPM1-202ENST00000288398 PSG5Q15238 335 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 ZNF562Q6V9R5 426 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 OVCH2Q7RTZ1 564 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 ANKRD13BQ86YJ7 626 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 PDPNQ86YL7 162 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 DRAXINQ8NBI3 349 aaPredicted RBP10.86□□□□□ -0.67
TPM1-202ENST00000288398 OR56B1Q8NGI3 324 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 HDHD3Q9BSH5 251 aaPredicted RBP10.86□□□□□ -0.67
TPM1-202ENST00000288398 LPAR5Q9H1C0 372 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 HSF4Q9ULV5 492 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 NUBP2Q9Y5Y2 271 aa10.86□□□□□ -0.67
TPM1-202ENST00000288398 KMT2CQ8NEZ4 4911 aaKnown RBP10.85□□□□□ -0.67
TPM1-202ENST00000288398 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 FCN1O00602 326 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 SLC17A2O00624 439 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 CASQ2O14958 399 aaPredicted RBP10.85□□□□□ -0.67
TPM1-202ENST00000288398 SOX15O60248 233 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 ZP3P21754 424 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 SERPINB10P48595 397 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 VEGFCP49767 419 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 FXYD3Q14802 87 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 SRSF7Q16629 238 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM1-202ENST00000288398 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 CCDC90BQ9GZT6 254 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 PARP12Q9H0J9 701 aaKnown RBP10.85□□□□□ -0.67
TPM1-202ENST00000288398 Q9N2K0 584 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 STUB1Q9UNE7 303 aa10.85□□□□□ -0.67
TPM1-202ENST00000288398 RBM7Q9Y580 266 aaKnown RBP10.85□□□□□ -0.67
TPM1-202ENST00000288398 A0A0A6YYD4 124 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 TRDCB7Z8K6 153 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 M0R1X1 148 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 SLC25A17O43808 307 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 SCTP09683 121 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 CD3GP09693 182 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 FRMD6-AS1P0C7T7 363 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 PSMD7P51665 324 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 QRFPP83859 136 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 C19orf54Q5BKX5 351 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 SBSPONQ8IVN8 264 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 SGPP2Q8IWX5 399 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
TPM1-202ENST00000288398 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 PTX4Q96A99 478 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 ARHGAP5-AS1Q96IT6 56 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 AGMATQ9BSE5 352 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
TPM1-202ENST00000288398 SLC35D1Q9NTN3 355 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 RDH8Q9NYR8 311 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 GAB2Q9UQC2 676 aa10.84□□□□□ -0.67
TPM1-202ENST00000288398 AK6Q9Y3D8 172 aaKnown RBP10.84□□□□□ -0.67
TPM1-202ENST00000288398 H3BUA1 57 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms