RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 TOX3O15405 576 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 LYZL6O75951 148 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 IGF1P05019 195 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CRHP06850 196 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ACKR3P25106 362 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 NPBWR1P48145 328 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 MLF1P58340 268 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 LSM6P62312 80 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 POLR2GP62487 172 aaKnown RBP eCLIP2.45□□□□□ -2.02
HERC4-201ENST00000277817 GNG3P63215 75 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PAX5Q02548 391 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 NHLH2Q02577 135 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PJVKQ0ZLH3 352 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 C3AR1Q16581 482 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNF718Q3SXZ3 478 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 PRSS54Q6PEW0 395 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FAM58AQ8N1B3 248 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SLC35G3Q8N808 338 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR10V1Q8NGI7 309 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR5C1Q8NGR4 320 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ABHD3Q8WU67 409 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DYRK2Q92630 601 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TMEM45BQ96B21 275 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 C12orf57Q99622 126 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 HDHD3Q9BSH5 251 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 GSN-AS1Q9NRJ2 163 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 C19orf12Q9NSK7 152 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RASL12Q9NYN1 266 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ANXA10Q9UJ72 324 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 KLK13Q9UKR3 277 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 VSIG4Q9Y279 399 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DOCK6Q96HP0 2047 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 IGKV1D-42A0A075B6H8 117 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 LRP5LA4QPB2 252 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 LINC00862A6NCI5 91 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PPP5D1E7EU14 171 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 H0YIZ8 118 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 H7BYZ3 331 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 SIGLEC5O15389 551 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TSPAN2O60636 221 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PDCD6O75340 191 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MGST1P10620 155 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 DAOP14920 347 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 NQO2P16083 231 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 RPS4Y1P22090 263 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 CALCRP30988 508 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 UBE2G2P60604 165 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 SNRPEP62304 92 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 DHODHQ02127 395 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TMEM267Q0VDI3 215 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 MS4A18Q3C1V0 323 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PIGYQ3MUY2 71 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 LINC01590Q5TEZ4 76 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 ZNF787Q6DD87 383 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 LYZL2Q7Z4W2 148 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 FAM24BQ8N5W8 94 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 RBMXL3Q8N7X1 1067 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 OR2M3Q8NG83 312 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 APOBEC4Q8WW27 367 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 SARAFQ96BY9 339 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 IP6K3Q96PC2 410 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 CABLES2Q9BTV7 478 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TRAF4Q9BUZ4 470 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 PARD6GQ9BYG4 376 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 NAA60Q9H7X0 242 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TMED3Q9Y3Q3 217 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MMP24Q9Y5R2 645 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 UNC80Q8N2C7 3258 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 A0A0J9YW62 118 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TRBV5-5A0A0J9YX44 114 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MDFIC2A0A1B0GVS7 189 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TMEM218A2RU14 115 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 SPRY3O43610 288 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MT-CO3P00414 261 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 NGFP01138 241 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 METTL15P1P0C7V9 234 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 SELEP16581 610 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 APOBEC3AP31941 199 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 GABRA4P48169 554 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MEOX1P50221 254 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 DVL1P1P54792 670 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 C19orf48Q6RUI8 117 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 UQCC3Q6UW78 93 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 IL34Q6ZMJ4 242 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 ZNF429Q86V71 674 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 BAGE3Q86Y29 109 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 BAGE2Q86Y30 109 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 ZNF561Q8N587 486 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 OR2Z1Q8NG97 314 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MRPL24Q96A35 216 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 R3HDM4Q96D70 268 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PIK3IP1Q96FE7 263 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 DUX5Q96PT3 197 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 SMIM7Q9BQ49 75 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 RAB1BQ9H0U4 201 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TMEM9BQ9NQ34 198 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MMP26Q9NRE1 261 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 UQCC1Q9NVA1 299 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms