RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 LINC00473A8K010 186 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 C17orf98A8MV24 154 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 B8ZZF3 427 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 E5RGE8 158 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ITGB1BP1O14713 200 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 IGHV2-70P01814 119 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 HKR1P10072 659 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 CCL3L1P16619 93 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 RPL12P30050 165 aaKnown RBP9.53□□□□□ -0.88
SCAF11-201ENST00000266589 RAB7AP51149 207 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ZNF816Q0VGE8 651 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-201ENST00000266589 TMEM30BQ3MIR4 351 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 TMEM200BQ69YZ2 307 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ALKAL2Q6UX46 152 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 SPAG16Q8N0X2 631 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ST8SIA2Q92186 375 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 UBTD1Q9HAC8 227 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ZC4H2Q9NQZ6 224 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 LPAR3Q9UBY5 353 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 NSG2Q9Y328 171 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 ARID1AO14497 2285 aa9.53□□□□□ -0.88
SCAF11-201ENST00000266589 YLPM1P49750 1951 aaKnown RBP9.53□□□□□ -0.88
SCAF11-201ENST00000266589 A0A1B0GU03 582 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 PROP1O75360 226 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 NXPH3O95157 252 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 FSTL3O95633 263 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 SLC25A6P12236 298 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 GNG10P50151 68 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 BRWD1-AS2P59051 145 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 LINC00205P59089 165 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 IZUMO4Q1ZYL8 232 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 RPL39P5Q59GN2 51 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 CT45A1Q5HYN5 189 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.88
SCAF11-201ENST00000266589 AVPI1Q5T686 147 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 ZNF439Q8NDP4 499 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 CT45A3Q8NHU0 189 aa9.52□□□□□ -0.88
SCAF11-201ENST00000266589 RPUSD1Q9UJJ7 312 aaKnown RBP9.52□□□□□ -0.88
SCAF11-201ENST00000266589 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.88
SCAF11-201ENST00000266589 M0R1X1 148 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.89
SCAF11-201ENST00000266589 ERVFRD-1P60508 538 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 POLR2GP62487 172 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCAF11-201ENST00000266589 TCTEX1D1Q8N7M0 179 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 DMBX1Q8NFW5 382 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 PCNPQ8WW12 178 aaKnown RBP9.52□□□□□ -0.89
SCAF11-201ENST00000266589 NEU4Q8WWR8 484 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-201ENST00000266589 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 PLEKHA2Q9HB19 425 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 FAM212BQ9NTI7 297 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-201ENST00000266589 CACNG5Q9UF02 275 aa9.52□□□□□ -0.89
SCAF11-201ENST00000266589 SAA2-SAA4A0A096LPE2 208 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 A6NNC1 897 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 SSSCA1O60232 199 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 PITX3O75364 302 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 S1PR2O95136 353 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 SAA2P0DJI9 122 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-201ENST00000266589 DAOP14920 347 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 ID3Q02535 119 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 NCR3LG1Q68D85 454 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 HEPN1Q6WQI6 88 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 Q6ZRM9 215 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 OR10A7Q8NGE5 316 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 SCARB1Q8WTV0 552 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 RPS10-NUDT3A0A1W2PQS6 291 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 RAB29O14966 203 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 KRASP01116 189 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 PVALBP20472 110 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-201ENST00000266589 G6PCP35575 357 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 P2RY1P47900 373 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 MRPS11P82912 194 aaKnown RBP9.51□□□□□ -0.89
SCAF11-201ENST00000266589 LYG1Q8N1E2 194 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 GSX2Q9BZM3 304 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 C11orf1Q9H5F2 150 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 CYTL1Q9NRR1 136 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 GAB2Q9UQC2 676 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 MMP24Q9Y5R2 645 aa9.51□□□□□ -0.89
SCAF11-201ENST00000266589 WRBO00258 174 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 PPIHO43447 177 aaKnown RBP9.5□□□□□ -0.89
SCAF11-201ENST00000266589 FCGR3BO75015 233 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 ATG12O94817 140 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 CDKN1AP38936 164 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 RAB14P61106 215 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 CLLU1Q5K131 121 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 C1orf229Q6ZS94 237 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-201ENST00000266589 SLC25A48Q6ZT89 311 aaKnown RBP9.5□□□□□ -0.89
SCAF11-201ENST00000266589 ODF3L1Q8IXM7 274 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-201ENST00000266589 CD300LFQ8TDQ1 290 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 TIMD4Q96H15 378 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 USF3Q68DE3 2245 aa9.5□□□□□ -0.89
SCAF11-201ENST00000266589 TAAR5O14804 337 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 GPR137BO60478 399 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 TPT1P13693 172 aaKnown RBP9.49□□□□□ -0.89
SCAF11-201ENST00000266589 VAMP2P63027 116 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 TMEM155Q4W5P6 130 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 CLEC9AQ6UXN8 241 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms