RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 hCG_38984A0A1B0GV85 526 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 LEUTXA8MZ59 168 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 PGLYRP1O75594 196 aaPredicted RBP13.19□□□□□ -0.3
TIMP3-201ENST00000266085 MMP9P14780 707 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 SERF2P84101 59 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 ZNF645Q8N7E2 425 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 ASCL3Q9NQ33 180 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 MRPS18CQ9Y3D5 142 aaKnown RBP13.19□□□□□ -0.3
TIMP3-201ENST00000266085 SEC14L6B5MCN3 397 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 ZNF250P15622 560 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 AWAT1Q58HT5 328 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 STXBP6Q8NFX7 210 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 WDYHV1Q96HA8 205 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 TRAF4Q9BUZ4 470 aaPredicted RBP13.19□□□□□ -0.3
TIMP3-201ENST00000266085 MRPL13Q9BYD1 178 aaKnown RBP13.19□□□□□ -0.3
TIMP3-201ENST00000266085 C5orf66Q9H5L9 145 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 LYPD3O95274 346 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 CD74P04233 296 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 CD1BP29016 333 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 LHX2P50458 406 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 FGFRL1Q8N441 504 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 GPHA2Q96T91 129 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 NPVFQ9HCQ7 196 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 LINC00862A6NCI5 91 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 KCNAB3O43448 404 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 PITX3O75364 302 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
TIMP3-201ENST00000266085 CLDN18P56856 261 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 OR5P3Q8WZ94 311 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 DEDDO75618 318 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 SPCS3P61009 180 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 CXorf66Q5JRM2 361 aaPredicted RBP13.18□□□□□ -0.3
TIMP3-201ENST00000266085 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 C1QL2Q7Z5L3 287 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 SEC11CQ9BY50 192 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
TIMP3-201ENST00000266085 PAGE4O60829 102 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 COX6B1P14854 86 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 RUNX1Q01196 453 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 ANKRD55Q3KP44 614 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 ACSF3Q4G176 576 aaPredicted RBP13.18□□□□□ -0.3
TIMP3-201ENST00000266085 MUC15Q8N387 334 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 C9orf106Q8NAJ2 232 aa13.18□□□□□ -0.3
TIMP3-201ENST00000266085 SLC2A8Q9NY64 477 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 A0A0G2JK05 382 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 MST1P26927 711 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 GLIPR1P48060 266 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 ERVS71-1P61550 626 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 UNC119Q13432 240 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 HILPDAQ9Y5L2 63 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 KCNMB2Q9Y691 235 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 FCN1O00602 326 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 FAM57AQ8TBR7 257 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 NOTCH4Q99466 2003 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 NOTCH2Q04721 2471 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
TIMP3-201ENST00000266085 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
TIMP3-201ENST00000266085 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 SIGIRRQ6IA17 410 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 PERPQ96FX8 193 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
TIMP3-201ENST00000266085 EP400Q96L91 3159 aa13.17□□□□□ -0.3
TIMP3-201ENST00000266085 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 OR10G8Q8NGN5 311 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 NOL4LQ96MY1 436 aaPredicted RBP13.16□□□□□ -0.3
TIMP3-201ENST00000266085 ELOVL5Q9NYP7 299 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 ACACBO00763 2458 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 MPDZO75970 2070 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 PINLYPA6NC86 204 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
TIMP3-201ENST00000266085 ARG1P05089 322 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 KRTDAPP60985 99 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 C1orf162Q8NEQ5 155 aaPredicted RBP13.16□□□□□ -0.3
TIMP3-201ENST00000266085 OR2T10Q8NGZ9 312 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 LILRB1Q8NHL6 650 aaPredicted RBP13.16□□□□□ -0.3
TIMP3-201ENST00000266085 JPT1Q9UK76 154 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 C7orf77A4D0Y5 90 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 OR5R1Q8NH85 324 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 OR10C1Q96KK4 312 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 FABP4P15090 132 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 H2BFSP57053 126 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 TPPP2P59282 170 aa13.16□□□□□ -0.3
TIMP3-201ENST00000266085 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 CXorf1O96002 111 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 RPL8P62917 257 aaKnown RBP13.15□□□□□ -0.3
TIMP3-201ENST00000266085 HIST1H3AP68431 136 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 ECSCRQ19T08 205 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
TIMP3-201ENST00000266085 IDI2-AS1Q9NZ38 188 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 FER1L5A0AVI2 2057 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 DOCK9Q9BZ29 2069 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 A0A1B0GTI1 187 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms