RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TLE1Q04724 770 aa10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 CPEB3Q8NE35 698 aaKnown RBP10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 FGF23Q9GZV9 251 aaPredicted RBP10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 WDR54Q9H977 334 aa10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 ZFP30Q9Y2G7 519 aa10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 UNC13CQ8NB66 2214 aa10.47□□□□□ -0.73
CHMP2B-201ENST00000263780 NUPR1O60356 82 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 WDR1O75083 606 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 NDUFB4O95168 129 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 Q6ZWC4 215 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 OR10G8Q8NGN5 311 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 SH2D2AQ9NP31 389 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 MPC1Q9Y5U8 109 aa10.46□□□□□ -0.73
CHMP2B-201ENST00000263780 A0A1W2PPV4 95 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 LRRC30A6NM36 301 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 A6NNC1 897 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 ANKRD30BLA7E2S9 258 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 SYNGR1O43759 233 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 CXCL13O43927 109 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 GNG3P63215 75 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 MRPL14Q6P1L8 145 aaKnown RBP10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 SLC25A45Q8N413 288 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 HSPB9Q9BQS6 159 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 PKIBQ9C010 78 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 OPN3Q9H1Y3 402 aaPredicted RBP10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 TRAPPC2LQ9UL33 140 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 WIPI2Q9Y4P8 454 aa10.46□□□□□ -0.74
CHMP2B-201ENST00000263780 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 MYF5P13349 255 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 CCNOP22674 350 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 B3GALT5-AS1P59052 145 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 Q0VG73 95 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 OR5I1Q13606 314 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 BAGE3Q86Y29 109 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 BAGE2Q86Y30 109 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 DRAM1Q8N682 238 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 DTD1Q8TEA8 209 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 TMEM204Q9BSN7 226 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 SAMD10Q9BYL1 202 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 KIAA0100Q14667 2235 aaKnown RBP10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 A8MXE2 369 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 MMP23AO75900 390 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF90Q03938 601 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 CATR1Q13166 79 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 FBXO46Q6PJ61 603 aaPredicted RBP10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 RPS19BP1Q86WX3 136 aaKnown RBP10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 TCTEX1D1Q8N7M0 179 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 TMEM45BQ96B21 275 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 PAM16Q9Y3D7 125 aa10.45□□□□□ -0.74
CHMP2B-201ENST00000263780 MED12Q93074 2177 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 IGHV1-45A0A0A0MS14 117 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 G3V3Y1 287 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 C1QTNF9P0C862 333 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 TFF3Q07654 80 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 SIGLECL1Q8N7X8 197 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF586Q9NXT0 402 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 CHD3Q12873 2000 aaKnown RBP10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 C5orf49A4QMS7 147 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 IFNL4K9M1U5 179 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 MPDU1O75352 247 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 LHX2P50458 406 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 BATFQ16520 125 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF497Q6ZNH5 498 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 GGNQ86UU5 652 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 VN1R17PQ8TDU5 208 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 IMMP1LQ96LU5 166 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 RNF2Q99496 336 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 LINC00470Q9BZP3 86 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 MSL2Q9HCI7 577 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 PLA2G3Q9NZ20 509 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 IL36BQ9NZH7 164 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 CLN8Q9UBY8 286 aa10.44□□□□□ -0.74
CHMP2B-201ENST00000263780 A0A1B0GUS0 222 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 RAB29O14966 203 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 SIAH2O43255 324 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 SERF1AO75920 110 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 CRYAAP02489 173 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 RAC2P15153 192 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 TIMP3P35625 211 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 YRDCQ86U90 279 aaKnown RBP10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 Q8IYB0 196 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF645Q8N7E2 425 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 OR10D3Q8NH80 312 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 CCDC74BQ96LY2 380 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 KIAA2026Q5HYC2 2103 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 GRIFINA4D1Z8 144 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 MRPL33O75394 65 aaKnown RBP10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 P04436 131 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 P0C879 139 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 ATP5G3P48201 142 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 RAB7AP51149 207 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 RPP30P78346 268 aaKnown RBP10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 COX19Q49B96 90 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms