RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DDTP30046 118 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 GNB2P62879 340 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 WFDC11Q8NEX6 87 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 RAB24Q969Q5 203 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 LPAR2Q9HBW0 351 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 Q9N2K0 584 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 MMP26Q9NRE1 261 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 DSCAML1Q8TD84 2053 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 ERVFRD-1P60508 538 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 SSBP3Q9BWW4 388 aaPredicted RBP22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 UQCC1Q9NVA1 299 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 C22orf46C9J442 243 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 FAM157AC9JC47 383 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 RNF223E7ERA6 249 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 SSTR5P35346 364 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 RPL31P62899 125 aaKnown RBP22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 COTL1Q14019 142 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 FAAP20Q6NZ36 180 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 FAM185AQ8N0U4 392 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 OR2AK2Q8NG84 335 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 SVIPQ8NHG7 77 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 ZNF469Q96JG9 3925 aaPredicted RBP22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 ABCA2Q9BZC7 2435 aa22.68■■□□□ 1.22
SMARCD3-201ENST00000262188 SCTP09683 121 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 LCN2P80188 198 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 HMGN3Q15651 99 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 FAM53AQ6NSI3 398 aaPredicted RBP22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 ZNF383Q8NA42 475 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 KCNIP3Q9Y2W7 256 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 A0A096LNT2 108 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 DTYMKP23919 212 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 S100A2P29034 98 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 NUTF2P61970 127 aaKnown RBP22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 TMEM200BQ69YZ2 307 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 ZNF880Q6PDB4 577 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 ETV3LQ6ZN32 361 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 HOGA1Q86XE5 327 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 RFESDQ8TAC1 157 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 PRDM13Q9H4Q3 707 aa22.67■■□□□ 1.22
SMARCD3-201ENST00000262188 HOXB5P09067 269 aa22.66■■□□□ 1.22
SMARCD3-201ENST00000262188 SLC25A4P12235 298 aa22.66■■□□□ 1.22
SMARCD3-201ENST00000262188 CCL3L1P16619 93 aa22.66■■□□□ 1.22
SMARCD3-201ENST00000262188 HOXA5P20719 270 aa22.66■■□□□ 1.22
SMARCD3-201ENST00000262188 C21orf62-AS1Q17RA5 79 aa22.66■■□□□ 1.22
SMARCD3-201ENST00000262188 ANAPC10Q9UM13 185 aa22.66■■□□□ 1.22
SMARCD3-201ENST00000262188 KIAA1324LA8MWY0 1029 aaPredicted RBP22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 M0QYG6 137 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 CD3DP04234 171 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 OMGP23515 440 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 H2BFSP57053 126 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 PAX5Q02548 391 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 TAF9BQ9HBM6 251 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 MARCH11A6NNE9 402 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 C12orf77C9JDV5 145 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 MBP02144 154 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 SLC25A16P16260 332 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 OR1L1Q8NH94 360 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 STOML3Q8TAV4 291 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 GPR61Q9BZJ8 451 aa22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 RIMS4Q9H426 269 aaPredicted RBP22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 MBNL3Q9NUK0 354 aaKnown RBP22.65■■□□□ 1.22
SMARCD3-201ENST00000262188 SVEP1Q4LDE5 3571 aa22.64■■□□□ 1.22
SMARCD3-201ENST00000262188 TRBV6-6A0A0A6YYG2 114 aa22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 PMP2P02689 132 aa22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 USF1P22415 310 aaPredicted RBP22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 CDX1P47902 265 aaPredicted RBP22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 LTC4SQ16873 150 aa22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 ZNF546Q86UE3 836 aa22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 YLPM1P49750 1951 aaKnown RBP22.64■■□□□ 1.21
SMARCD3-201ENST00000262188 NHLH2Q02577 135 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 SRSF4Q08170 494 aaKnown RBP22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 RPUSD1Q9UJJ7 312 aaKnown RBP22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 IGKV1-6A0A0C4DH72 117 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 ANKRD20A5PA0PJZ0 165 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 SDCBPO00560 298 aaPredicted RBP22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 HRH1P35367 487 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 DLX1P56177 255 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 ACTBP60709 375 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 ACTG1P63261 375 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 HERPUD1Q15011 391 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 PYY3Q5JQD4 70 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 UTF1Q5T230 341 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 KIRREL1Q96J84 757 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 ZNF286AQ9HBT8 521 aa22.63■■□□□ 1.21
SMARCD3-201ENST00000262188 RNF222A6NCQ9 220 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 H7C1Q1 480 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 NQO2P16083 231 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 HLA-DRB3P79483 266 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 PRB3Q04118 309 aaPredicted RBP22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 PJVKQ0ZLH3 352 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 PRSS57Q6UWY2 283 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 IL1F10Q8WWZ1 152 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 RAB39BQ96DA2 213 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 FOXC2Q99958 501 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 NCOR1P1Q9H4R4 102 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 ANXA10Q9UJ72 324 aa22.62■■□□□ 1.21
SMARCD3-201ENST00000262188 A0A087X0M5 115 aa22.61■■□□□ 1.21
SMARCD3-201ENST00000262188 TRGV10A0A0A0MS01 117 aa22.61■■□□□ 1.21
SMARCD3-201ENST00000262188 A0A1B0GX30 115 aa22.61■■□□□ 1.21
SMARCD3-201ENST00000262188 TRDCB7Z8K6 153 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms