RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.034e-9■■■■■ 29.8
PALB2-201ENST00000261584 SNURFLB1AK76 121 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 M0R143 59 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 S1PR2O95136 353 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 CTXN2P0C2S0 81 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 OR5G3P0C626 314 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 CRISP2P16562 243 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 SSTR5P35346 364 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 UCP3P55916 312 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 DNM1P46Q6ZS02 220 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 MRGPRGQ86SM5 289 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 SMRP1Q8NCR6 262 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 FAM216AQ8WUB2 273 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 FAM122AQ96E09 287 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 WNT10AQ9GZT5 417 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 HIPK2Q9H2X6 1198 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 ZNF391Q9UJN7 358 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 DENND4AQ7Z401 1863 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 COL6A3P12111 3177 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 A0A1W2PR77 199 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 ARL16Q0P5N6 197 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 C20orf204Q6ZNR8 217 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 TRIB1Q96RU8 372 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 TAAR3PQ9P1P4 343 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 REV3LO60673 3130 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 LOC102723971A0A1B0GUV8 181 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 SPRY3O43610 288 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 NAPSAO96009 420 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 IGHV2-70P01814 119 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 CSN3P07498 182 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 GATA2P23769 480 aaPredicted RBP8.62□□□□□ -1.03
PALB2-201ENST00000261584 PRB3Q04118 309 aaPredicted RBP8.62□□□□□ -1.03
PALB2-201ENST00000261584 REC114Q7Z4M0 266 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 C1QL4Q86Z23 238 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 FAM89BQ8N5H3 189 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 OR2Z1Q8NG97 314 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 GALNT14Q96FL9 552 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 RTL8AQ9BWD3 113 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 DEPPQ9NTK1 212 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 DLL3Q9NYJ7 618 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 ARL2-SNX15V9GYD0 113 aa8.62□□□□□ -1.03
PALB2-201ENST00000261584 TNCP24821 2201 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 EREGO14944 169 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 SLC31A2O15432 143 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 IGHMP01871 453 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 CEACAM1P13688 526 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 ACOT6Q3I5F7 207 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 SLC35E3Q7Z769 313 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 RND1Q92730 232 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 ST6GALNAC6Q969X2 333 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 PHF7Q9BWX1 381 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 AMBPP02760 352 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 CNN1P51911 297 aaKnown RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 RAB31Q13636 194 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 OR1C1Q15619 314 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 OR8B8Q15620 311 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 VAMP3Q15836 100 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 HSD17B10Q99714 261 aaKnown RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 UBE2ZQ9H832 354 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 ATP23Q9Y6H3 246 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 ZNF253O75346 499 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 OR2H2O95918 312 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 NTF4P34130 210 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 REG1BP48304 166 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 HINT1P49773 126 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 SPSB3Q6PJ21 355 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 H1FOOQ8IZA3 346 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 FAM19A2Q8N3H0 131 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 NFAM1Q8NET5 270 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 M1APQ8TC57 530 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 BLNKQ8WV28 456 aa8.61□□□□□ -1.03
PALB2-201ENST00000261584 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
PALB2-201ENST00000261584 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
PALB2-201ENST00000261584 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.6□□□□□ -1.03
PALB2-201ENST00000261584 MT-CO3P00414 261 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 IRF2P14316 349 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 EPHA8P29322 1005 aaPredicted RBP8.6□□□□□ -1.03
PALB2-201ENST00000261584 TBC1D28Q2M2D7 210 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 FAM201AQ5SY85 155 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
PALB2-201ENST00000261584 Q6ZN92 141 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 LYG1Q8N1E2 194 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 H1FXQ92522 213 aaKnown RBP8.6□□□□□ -1.03
PALB2-201ENST00000261584 C18orf12Q96KH6 178 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 RNF122Q9H9V4 155 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 LOXL2Q9Y4K0 774 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 FRMPD3Q5JV73 1810 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 APOA2P02652 100 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 CELA3BP08861 270 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
PALB2-201ENST00000261584 CTAG1AP78358 180 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 ABLIM2Q6H8Q1 611 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 MDP1Q86V88 176 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 OR8I2Q8N0Y5 310 aa8.6□□□□□ -1.03
PALB2-201ENST00000261584 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms