RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RDH5Q92781 318 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 HYLS1Q96M11 299 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 GPR82Q96P67 336 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 TP53RKQ96S44 253 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 CDX2Q99626 313 aaPredicted RBP2.86□□□□□ -1.95
CCDC54-201ENST00000261058 MS4A6AQ9H2W1 248 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF331Q9NQX6 463 aaPredicted RBP2.86□□□□□ -1.95
CCDC54-201ENST00000261058 CCL28Q9NRJ3 127 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 CALYQ9NYX4 217 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 ERG28Q9UKR5 140 aa2.86□□□□□ -1.95
CCDC54-201ENST00000261058 ZNFX1Q9P2E3 1918 aaKnown RBP2.86□□□□□ -1.95
CCDC54-201ENST00000261058 A0A087WX48 190 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 A0A0G2JN53 185 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR4C46A6NHA9 309 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 AIPO00170 330 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 UPK1AO00322 258 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 UBFD1O14562 309 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PIAS1O75925 651 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 HBZP02008 142 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 FABP3P05413 133 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 CRYBA1P05813 215 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PSG2P11465 335 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 MYL9P24844 172 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 BRS3P32247 399 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PFN3P60673 137 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 C1QTNF8P60827 252 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 DCDP81605 110 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 IHHQ14623 411 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 MORN2Q502X0 79 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TRMT12Q53H54 448 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 Q5BKY6 102 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 LDLRAD2Q5SZI1 272 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR2T5Q6IEZ7 315 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 IZUMO2Q6UXV1 221 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 FBXW12Q6X9E4 464 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 Q6ZN92 141 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 FAM231DQ6ZW35 169 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 STRADAQ7RTN6 431 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF571Q7Z3V5 609 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ARPINQ7Z6K5 226 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TCTEX1D1Q8N7M0 179 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR4M1Q8NGD0 313 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR5A2Q8NGI9 324 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR51G1Q8NGK1 321 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR13C8Q8NGS7 320 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR2T29Q8NH02 315 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 SRSF12Q8WXF0 261 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 SLC7A6Q92536 515 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 APOBEC3DQ96AK3 386 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 LRRC58Q96CX6 371 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 LINC00052Q96N35 136 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PITX2Q99697 317 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PSMG3Q9BT73 122 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 DOHHQ9BU89 302 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF436Q9C0F3 470 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 SRMSQ9H3Y6 488 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 POMKQ9H5K3 350 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 RNF167Q9H6Y7 350 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TAF9BQ9HBM6 251 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 KCNJ16Q9NPI9 418 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 MRPL16Q9NX20 251 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ANXA10Q9UJ72 324 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ST3GAL6Q9Y274 331 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 CTTNBP2Q8WZ74 1663 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 C2orf16Q68DN1 1984 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM131LA2VDJ0 1609 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 INO80Q9ULG1 1556 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TRAV8-4A0A0B4J246 113 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TRAV38-1A0A0B4J264 116 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 IGHV3OR16-9A0A0B4J2B5 98 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 A0A0J9YY10 115 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 A0A1B0GX78 115 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 A0A1W2PNU3 283 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 IFITM5A6NNB3 132 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 C12orf77C9JDV5 145 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 J3QRK9 145 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 RBFOX2O43251 390 aaKnown RBP eCLIP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 MFSD11O43934 449 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 GCM2O75603 506 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 AIFM1O95831 613 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 P01737 135 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OPN1SWP03999 348 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ADRA2AP08913 450 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ESDP10768 282 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 CYBAP13498 195 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 CD99P14209 185 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 KDELR1P24390 212 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TSPOP30536 169 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 MYCNOSP40205 109 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 GABRA2P47869 451 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR1E2P47887 323 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 TMBIM6P55061 237 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 EIF5AP63241 154 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 RHOGP84095 191 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PLCXD2Q0VAA5 305 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 IAH1Q2TAA2 248 aaPredicted RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 CEACAM16Q2WEN9 425 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ATP6AP1LQ52LC2 224 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 C1orf194Q5T5A4 169 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms