RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 SDHAF2Q9NX18 166 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
GYPC-201ENST00000259254 BUB1B-PAK6H3BSN5 160 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 HTR1DP28221 377 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 PIGPP57054 158 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 ZNF626Q68DY1 528 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.68□□□□□ -0.38
GYPC-201ENST00000259254 ZBTB34Q8NCN2 500 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 OR4P4Q8NGL7 312 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
GYPC-201ENST00000259254 SLC2A9Q9NRM0 540 aa12.68□□□□□ -0.38
GYPC-201ENST00000259254 ZANQ9Y493 2812 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 INAFM1C9JVW0 142 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 NPFFO15130 113 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 CD5LO43866 347 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 PEX14O75381 377 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 DHFRP00374 187 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 VAMP1P23763 118 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 CEACAM3P40198 252 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 REG1BP48304 166 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 MSMO1Q15800 293 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 C4orf46Q504U0 113 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 C11orf88Q6PI97 169 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 BVESQ8NE79 360 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
GYPC-201ENST00000259254 RPEQ96AT9 228 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 GPHA2Q96T91 129 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 MARVELD1Q9BSK0 173 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 YAE1D1Q9NRH1 226 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 TLN2Q9Y4G6 2542 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
GYPC-201ENST00000259254 YLPM1P49750 1951 aaKnown RBP12.67□□□□□ -0.38
GYPC-201ENST00000259254 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 IGHV1-69DA0A0B4J2H0 117 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 RNF212BA8MTL3 300 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 LEUTXA8MZ59 168 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 PGLYRP1O75594 196 aaPredicted RBP12.66□□□□□ -0.38
GYPC-201ENST00000259254 AVPP01185 164 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 IGLV2-14P01704 120 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 IGHV1-69P01742 117 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 IGHV4-38-2P0DP08 117 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 CATR1Q13166 79 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 LHFPL4Q7Z7J7 247 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 TBC1D26Q86UD7 250 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 ODF3L1Q8IXM7 274 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 DRAXINQ8NBI3 349 aaPredicted RBP12.66□□□□□ -0.38
GYPC-201ENST00000259254 OR51H1Q8NH63 302 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 TCTEX1D2Q8WW35 142 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 C5orf30Q96GV9 206 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 GAB2Q9UQC2 676 aa12.66□□□□□ -0.38
GYPC-201ENST00000259254 MPPED1O15442 326 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 GAPDHP04406 335 aaKnown RBP12.65□□□□□ -0.38
GYPC-201ENST00000259254 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 EPHA1P21709 976 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 SAA4P35542 130 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 RND3P61587 244 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 MIDNQ504T8 468 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 ZNF66Q6ZN08 573 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 ZNF833PQ6ZTB9 187 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 KCTD9Q7L273 389 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 CAPSLQ8WWF8 208 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 TMEM230Q96A57 120 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 HSD17B10Q99714 261 aaKnown RBP12.65□□□□□ -0.38
GYPC-201ENST00000259254 MRPL20Q9BYC9 149 aaKnown RBP12.65□□□□□ -0.38
GYPC-201ENST00000259254 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 TBL2Q9Y4P3 447 aaKnown RBP12.65□□□□□ -0.38
GYPC-201ENST00000259254 HILPDAQ9Y5L2 63 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.38
GYPC-201ENST00000259254 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 PRAF2O60831 178 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 OR4E1P0C645 316 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 THBS3P49746 956 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 RAG2P55895 527 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 UBE2MP61081 183 aaKnown RBP12.64□□□□□ -0.39
GYPC-201ENST00000259254 PPP1R1AQ13522 171 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 DIAPH2-AS1Q14236 149 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 SLC9A3R2Q15599 337 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 TMEM128Q5BJH2 165 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 OR2B11Q5JQS5 317 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 MOB3BQ86TA1 216 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 ZNF251Q9BRH9 671 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 SEC22CQ9BRL7 303 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 GPN1Q9HCN4 374 aaPredicted RBP12.64□□□□□ -0.39
GYPC-201ENST00000259254 LIN7CQ9NUP9 197 aaKnown RBP12.64□□□□□ -0.39
GYPC-201ENST00000259254 KCNIP3Q9Y2W7 256 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 ABCA1O95477 2261 aa12.64□□□□□ -0.39
GYPC-201ENST00000259254 KIAA2026Q5HYC2 2103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms