RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 GNG3P63215 75 aa13.56□□□□□ -0.24
SLC6A8-201ENST00000253122 LRRC75BQ2VPJ9 315 aa13.56□□□□□ -0.24
SLC6A8-201ENST00000253122 TEX38Q6PEX7 206 aa13.56□□□□□ -0.24
SLC6A8-201ENST00000253122 CXorf67Q86X51 503 aaPredicted RBP13.56□□□□□ -0.24
SLC6A8-201ENST00000253122 CDH20Q9HBT6 801 aa13.56□□□□□ -0.24
SLC6A8-201ENST00000253122 PRUNE2Q8WUY3 3088 aa13.56□□□□□ -0.24
SLC6A8-201ENST00000253122 IGHV3-43A0A0B4J1X8 118 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 SNURFLB1AK76 121 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 IFNL4K9M1U5 179 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 IGHV3-13P01766 116 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 IGHV3-7P01780 117 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 IGHV3-43DP0DP04 118 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 GCH1P30793 250 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 GNB2P62879 340 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 CCL7P80098 99 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 VAMP3Q15836 100 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 C10orf128Q5T292 105 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 USF3Q68DE3 2245 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 CBY3A6NI87 242 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 CTSSP25774 331 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 SRP14P37108 136 aaKnown RBP13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 TNFSF10P50591 281 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 RND2P52198 227 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 NMSQ5H8A3 153 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 BEND2Q8NDZ0 799 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 SSMEM1Q8WWF3 244 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 STARD4Q96DR4 205 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 MRPL49Q13405 166 aaKnown RBP13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 ARSJQ5FYB0 599 aaPredicted RBP13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 TGIF2LYQ8IUE0 185 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 SRXN1Q9BYN0 137 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 HIPK2Q9H2X6 1198 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 TAAR3PQ9P1P4 343 aa13.55□□□□□ -0.24
SLC6A8-201ENST00000253122 FAM166BA8MTA8 275 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 LIFP15018 202 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 IL3RAP26951 378 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 COL5A1-AS1Q5SY13 56 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 RPP25LQ8N5L8 163 aaKnown RBP13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 CCDC74BQ96LY2 380 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 WNT5BQ9H1J7 359 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 FSCN3Q9NQT6 498 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 EXT1Q16394 746 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 CADP27708 2225 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 MKRN2OSH3BPM6 223 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 SYNGR3O43761 229 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 ZNF253O75346 499 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 NGFP01138 241 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 CD82P27701 267 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 ARL16Q0P5N6 197 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 OR1L6Q8NGR2 347 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 GALMQ96C23 342 aa13.54□□□□□ -0.24
SLC6A8-201ENST00000253122 DIRC3C9JPN6 131 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 HOXC12P31275 282 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 VPS25Q9BRG1 176 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 hCG_38984A0A1B0GV85 526 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 SH2D1BO14796 132 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 C1QTNF9P0C862 333 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 GZMHP20718 246 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 MAS1LP35410 378 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 UBE2NP61088 152 aaKnown RBP13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 Q6ZRM9 215 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 APH1AQ96BI3 265 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 CFHR1Q03591 330 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 MBD3L1Q8WWY6 194 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 B4GALT7Q9UBV7 327 aa13.53□□□□□ -0.24
SLC6A8-201ENST00000253122 ZG16O60844 167 aa13.52□□□□□ -0.24
SLC6A8-201ENST00000253122 OPN3Q9H1Y3 402 aaPredicted RBP13.52□□□□□ -0.24
SLC6A8-201ENST00000253122 COL4A2P08572 1712 aa13.52□□□□□ -0.24
SLC6A8-201ENST00000253122 TRAV1-1A0A0B4J248 108 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 NAPSAO96009 420 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 TFF3Q07654 80 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 ATP6V1FQ16864 119 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 GCNT2Q8N0V5 402 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 FGFBP3Q8TAT2 258 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 ZCCHC14Q8WYQ9 949 aaKnown RBP13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 TMEM208Q9BTX3 173 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 FOXJ2Q9P0K8 574 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 CLCF1Q9UBD9 225 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 DOPEY2Q9Y3R5 2298 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 OR7C2O60412 319 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 ATP5G3P48201 142 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 TIGITQ495A1 244 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 DTX1Q86Y01 620 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 NABP1Q96AH0 204 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 ZNF331Q9NQX6 463 aaPredicted RBP13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 DECR2Q9NUI1 292 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 SEMA5BQ9P283 1151 aa13.52□□□□□ -0.25
SLC6A8-201ENST00000253122 PCDH15Q96QU1 1955 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms