RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 OR10J5Q8NHC4 309 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 SLC25A38Q96DW6 304 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 RHBDL2Q9NX52 303 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 ZNF221Q9UK13 617 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 TMEM235A6NFC5 223 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 TRIM64CA6NLI5 447 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 NDUFA3O95167 84 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 DIRAS3O95661 229 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 DTYMKP23919 212 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 CFHR3Q02985 330 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 ZNF260Q3ZCT1 412 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 COMMD1Q8N668 190 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 NUDCD2Q8WVJ2 157 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 VCX3AQ9NNX9 186 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 WASHC3Q9Y3C0 194 aa18.03■□□□□ 0.48
LSM4-201ENST00000252816 AIREO43918 545 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 HLA-DRB1P01911 266 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 IGF1P05019 195 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 GSTP1P09211 210 aaKnown RBP18.02■□□□□ 0.48
LSM4-201ENST00000252816 OR8U9P0C7N5 309 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 MC5RP33032 325 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 SCAND1P57086 179 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 PNLIPRP3Q17RR3 467 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 BEAN1Q3B7T3 259 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 TIMM50Q3ZCQ8 353 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 PDLIM3Q53GG5 364 aaPredicted RBP18.02■□□□□ 0.48
LSM4-201ENST00000252816 OXLD1Q5BKU9 147 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 TEX38Q6PEX7 206 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 LCNL1Q6ZST4 164 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 ZNF383Q8NA42 475 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 OR8U1Q8NH10 309 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 ETV7Q9Y603 341 aa18.02■□□□□ 0.48
LSM4-201ENST00000252816 PRKDCP78527 4128 aaKnown RBP18.01■□□□□ 0.47
LSM4-201ENST00000252816 IGHV7-81A0A0B4J1V7 117 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 H7C2Y5 167 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 RRP9O43818 475 aaKnown RBP18.01■□□□□ 0.47
LSM4-201ENST00000252816 SCGNO76038 276 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 TFAP2AP05549 437 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 WFDC9Q8NEX5 89 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 C5orf30Q96GV9 206 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 ST6GALNAC5Q9BVH7 336 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 GON7Q9BXV9 100 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 OR2D2Q9H210 308 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 ZFP57Q9NU63 452 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 ZNF580Q9UK33 172 aa18.01■□□□□ 0.47
LSM4-201ENST00000252816 M0R1X1 148 aa18■□□□□ 0.47
LSM4-201ENST00000252816 SSX5O60225 188 aa18■□□□□ 0.47
LSM4-201ENST00000252816 PF4P02776 101 aa18■□□□□ 0.47
LSM4-201ENST00000252816 LSM3P62310 102 aaKnown RBP18■□□□□ 0.47
LSM4-201ENST00000252816 KPRPQ5T749 579 aaPredicted RBP18■□□□□ 0.47
LSM4-201ENST00000252816 LIN54Q6MZP7 749 aa18■□□□□ 0.47
LSM4-201ENST00000252816 ETV3LQ6ZN32 361 aa18■□□□□ 0.47
LSM4-201ENST00000252816 H1FOOQ8IZA3 346 aaPredicted RBP18■□□□□ 0.47
LSM4-201ENST00000252816 ZNF436-AS1Q8NC38 126 aaPredicted RBP18■□□□□ 0.47
LSM4-201ENST00000252816 GINS4Q9BRT9 223 aa18■□□□□ 0.47
LSM4-201ENST00000252816 OR51J1Q9H342 316 aa18■□□□□ 0.47
LSM4-201ENST00000252816 FBXL15Q9H469 300 aa18■□□□□ 0.47
LSM4-201ENST00000252816 SDHAF2Q9NX18 166 aa18■□□□□ 0.47
LSM4-201ENST00000252816 KIAA1456Q9P272 454 aa18■□□□□ 0.47
LSM4-201ENST00000252816 RRHO14718 337 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 IGKV1-16P04430 117 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 RPLP1P05386 114 aaKnown RBP17.99■□□□□ 0.47
LSM4-201ENST00000252816 VDAC1P21796 283 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 FOXE3Q13461 319 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 C8orf86Q6ZUL3 223 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 RNF152Q8N8N0 203 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 DCSTAMPQ9H295 470 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 GAB2Q9UQC2 676 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 WSB1Q9Y6I7 421 aa17.99■□□□□ 0.47
LSM4-201ENST00000252816 G3V318 75 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 FCN1O00602 326 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 ATP6V0E1O15342 81 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 RBBP9O75884 186 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 IGHG4P01861 327 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 CD33P20138 364 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 RPS19P39019 145 aaKnown RBP17.98■□□□□ 0.47
LSM4-201ENST00000252816 GNG2P59768 71 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 PITPNAQ00169 270 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 NDPQ00604 133 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 KLHL30-AS1Q8NEE0 82 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 PARP11Q9NR21 331 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 SPATA2Q9UM82 520 aa17.98■□□□□ 0.47
LSM4-201ENST00000252816 TRAV18A0A075B6X5 111 aa17.97■□□□□ 0.47
LSM4-201ENST00000252816 NUDT19A8MXV4 375 aa17.97■□□□□ 0.47
LSM4-201ENST00000252816 CXorf66Q5JRM2 361 aaPredicted RBP17.97■□□□□ 0.47
LSM4-201ENST00000252816 RNF5Q99942 180 aa17.97■□□□□ 0.47
LSM4-201ENST00000252816 ELANEP08246 267 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 IGLL1P15814 213 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 PPIFP30405 207 aaKnown RBP17.96■□□□□ 0.47
LSM4-201ENST00000252816 THBS3P49746 956 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 PSG5Q15238 335 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 PDPNQ86YL7 162 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 ZNF695Q8IW36 515 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 LINC00482Q8N8I6 264 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 FBXO7Q9Y3I1 522 aa17.96■□□□□ 0.47
LSM4-201ENST00000252816 RBM7Q9Y580 266 aaKnown RBP17.96■□□□□ 0.47
LSM4-201ENST00000252816 A0A0A6YYH2 397 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 A6NJ64 397 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 TMEM127O75204 238 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 APOA2P02652 100 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms