RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SLURP1P55000 103 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 INSL4Q14641 139 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 ECSCRQ19T08 205 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 RPL39P5Q59GN2 51 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 FAM27D1Q5T7N8 215 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 OR10K2Q6IF99 312 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 MOB1BQ7L9L4 216 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 C6orf201Q7Z4U5 140 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 NANOGP1Q8N7R0 232 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 OR5AN1Q8NGI8 311 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 PHYHIPQ92561 330 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 NICN1Q9BSH3 213 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 FAAP24Q9BTP7 215 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 TMEM59Q9BXS4 323 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 KCNK15Q9H427 330 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 C8orf4Q9NR00 106 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 PIPOXQ9P0Z9 390 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 KIAA1456Q9P272 454 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 GAB2Q9UQC2 676 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 A0A0A6YYD4 124 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 A0A1W2PN81 502 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 FOXI3A8MTJ6 420 aaPredicted RBP7.93□□□□□ -1.14
VPS50-201ENST00000251739 TMEM14DPA8MWL7 114 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 LINC01619G3V211 115 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 H3BS24 57 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 FCN1O00602 326 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 MYL12BO14950 172 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 RAB29O14966 203 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 SLC22A1O15245 554 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 SAP30O75446 220 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 RBBP9O75884 186 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 LY86O95711 162 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 FRMD6-AS1P0C7T7 363 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 CHRNA7P36544 502 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 SSBP2P81877 361 aaPredicted RBP7.93□□□□□ -1.14
VPS50-201ENST00000251739 AKIRIN2Q53H80 203 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 XP32Q5T750 250 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 RNLSQ5VYX0 342 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 PYHIN1Q6K0P9 492 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 AHSA2Q719I0 299 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 DHRSXQ8N5I4 330 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 KCNG3Q8TAE7 436 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 CASTOR1Q8WTX7 329 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 ARPC1AQ92747 370 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 NEDD4LQ96PU5 975 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 ABRACLQ9P1F3 81 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 LSM2Q9Y333 95 aaKnown RBP7.93□□□□□ -1.14
VPS50-201ENST00000251739 BIRC6Q9NR09 4857 aa7.93□□□□□ -1.14
VPS50-201ENST00000251739 TRIM64CA6NLI5 447 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 OR8U9P0C7N5 309 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 GP9P14770 177 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 MC5RP33032 325 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 ACSM3Q53FZ2 586 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 GLDNQ6ZMI3 551 aaPredicted RBP7.92□□□□□ -1.14
VPS50-201ENST00000251739 C8orf59Q8N0T1 100 aaPredicted RBP7.92□□□□□ -1.14
VPS50-201ENST00000251739 FAM89BQ8N5H3 189 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 MS4A15Q8N5U1 240 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 IL1F10Q8WWZ1 152 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 PTX4Q96A99 478 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 ABHD14BQ96IU4 210 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 GFI1Q99684 422 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 RNF5Q99942 180 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 TM2D3Q9BRN9 247 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 C11orf54Q9H0W9 315 aaPredicted RBP7.92□□□□□ -1.14
VPS50-201ENST00000251739 LPAR5Q9H1C0 372 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 GHITMQ9H3K2 345 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 STEAP1Q9UHE8 339 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 ERGIC3Q9Y282 383 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 WASHC3Q9Y3C0 194 aa7.92□□□□□ -1.14
VPS50-201ENST00000251739 SPDEFO95238 335 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 IGLV1-51P01701 117 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 IGKV1-16P04430 117 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 UCHL1P09936 223 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 HLA-DRB3P79483 266 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 PSG5Q15238 335 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 ACTBL2Q562R1 376 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 GLT8D1Q68CQ7 371 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 ZNF562Q6V9R5 426 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 OVCH2Q7RTZ1 564 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 PPP1R27Q86WC6 154 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 Q8N1Y9 231 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 OR6M1Q8NGM8 313 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 OR6Q1Q8NGQ2 317 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 HDHD3Q9BSH5 251 aaPredicted RBP7.91□□□□□ -1.14
VPS50-201ENST00000251739 FAM103A1Q9BTL3 118 aaKnown RBP7.91□□□□□ -1.14
VPS50-201ENST00000251739 RIMS4Q9H426 269 aaPredicted RBP7.91□□□□□ -1.14
VPS50-201ENST00000251739 SLA2Q9H6Q3 261 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 OR1A1Q9P1Q5 309 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 HSF4Q9ULV5 492 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 A3GALT2U3KPV4 340 aa7.91□□□□□ -1.14
VPS50-201ENST00000251739 HYDINQ4G0P3 5121 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 IGKV1-6A0A0C4DH72 117 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 A8MZ25 164 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 CASQ2O14958 399 aaPredicted RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 ARPC1BO15143 372 aaKnown RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 IGHV3-11P01762 117 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 HSPB1P04792 205 aaKnown RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 TFAP2AP05549 437 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 CDK1P06493 297 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms