RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 GLRX2Q9NS18 164 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 IGHV3-72A0A0B4J1Y9 119 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 BCL2P10415 239 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 PMCHP20382 165 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 SLC25A53Q5H9E4 307 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 CIB3Q96Q77 187 aaPredicted RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 PCGF1Q9BSM1 259 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 VSIRQ9H7M9 311 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 COL4A4P53420 1690 aaPredicted RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 MZT1Q08AG7 82 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 SRSF6Q13247 344 aaKnown RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 ZCCHC24Q8N2G6 241 aaKnown RBP11.66□□□□□ -0.54
NCLN-201ENST00000246117 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 GPR87Q9BY21 358 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
NCLN-201ENST00000246117 TRGV10A0A0A0MS01 117 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 A0A1B0GU03 582 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 C9orf172C9J069 976 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 M0R296 226 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 NDUFB4O95168 129 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 GGNQ86UU5 652 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 PLPPR1Q8TBJ4 325 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 WDFY4Q6ZS81 3184 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 B4E171 279 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 H0Y980 276 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
NCLN-201ENST00000246117 OR10J4P0C629 311 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 HLA-GP17693 338 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 TSPAN7P41732 249 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
NCLN-201ENST00000246117 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 FAM209BQ5JX69 171 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 C16orf82Q7Z2V1 217 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 FDCSPQ8NFU4 85 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 BLNKQ8WV28 456 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 PACRGQ96M98 296 aaPredicted RBP11.65□□□□□ -0.54
NCLN-201ENST00000246117 TAAR6Q96RI8 345 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
NCLN-201ENST00000246117 VAX2Q9UIW0 290 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 LINC00587B1AMM8 73 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 CNIH1O95406 144 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 FAM157CP0CG43 387 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 RSPO1Q2MKA7 263 aaPredicted RBP11.65□□□□□ -0.54
NCLN-201ENST00000246117 C22orf15Q8WYQ4 148 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 LURAP1Q96LR2 239 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 CRIM1Q9NZV1 1036 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 CLCF1Q9UBD9 225 aa11.65□□□□□ -0.54
NCLN-201ENST00000246117 HIST1H3AP68431 136 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 DTX1Q86Y01 620 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 RAB24Q969Q5 203 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 NEIL1Q96FI4 390 aaPredicted RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 CCL13Q99616 98 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 FOXD3Q9UJU5 478 aaPredicted RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 FGF16O43320 207 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 CRYGSP22914 178 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 TNFAIP6P98066 277 aaPredicted RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 MIC13Q5XKP0 118 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 MOB1BQ7L9L4 216 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 TAF15Q92804 592 aaKnown RBP eCLIP11.64□□□□□ -0.55
NCLN-201ENST00000246117 RCC1LQ96I51 464 aaKnown RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 PRDM14Q9GZV8 571 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 RAMP3O60896 148 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 CCL1P22362 96 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 PRDX2P32119 198 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 MPV17P39210 176 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 MRPS11P82912 194 aaKnown RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 EIF4E3Q8N5X7 224 aaKnown RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 CA5BP1Q8WTZ4 195 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 BTF3L4Q96K17 158 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 CARHSP1Q9Y2V2 147 aaKnown RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 ANKHD1Q8IWZ3 2542 aaKnown RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 NEURL1O76050 574 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 KLF3P57682 345 aaPredicted RBP11.64□□□□□ -0.55
NCLN-201ENST00000246117 TIGITQ495A1 244 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 RPL39P5Q59GN2 51 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 FAM214BQ7L5A3 538 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 OR2T10Q8NGZ9 312 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 TMEM171Q8WVE6 324 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
NCLN-201ENST00000246117 EYSQ5T1H1 3165 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 TRGV8A0A0C4DH27 118 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 PGPEP1LA6NFU8 196 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 C17orf98A8MV24 154 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 APOA2P02652 100 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 COX7A1P24310 79 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 CAMPP49913 170 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 RPS23P62266 143 aaKnown RBP11.63□□□□□ -0.55
NCLN-201ENST00000246117 PSG7Q13046 419 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 CXXC4Q9H2H0 198 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 TUBD1Q9UJT1 453 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 PRRG2O14669 202 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 C20orf204Q6ZNR8 217 aa11.63□□□□□ -0.55
NCLN-201ENST00000246117 SLC35E3Q7Z769 313 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms