RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 HLA-DRB5Q30154 266 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 PYDC2Q56P42 97 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 OR52W1Q6IF63 320 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 SBSPONQ8IVN8 264 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 ZNF565Q8N9K5 539 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 OR5M8Q8NGP6 311 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 OR4K15Q8NH41 348 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 MRPL30Q8TCC3 161 aaKnown RBP10.84□□□□□ -0.67
DDX39A-201ENST00000242776 LEAP2Q969E1 77 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 WDR12Q9GZL7 423 aaKnown RBP10.84□□□□□ -0.67
DDX39A-201ENST00000242776 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 IFT46Q9NQC8 304 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 KCNIP1Q9NZI2 227 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 UBE2J1Q9Y385 318 aaPredicted RBP10.84□□□□□ -0.67
DDX39A-201ENST00000242776 V9GYH0 126 aa10.84□□□□□ -0.67
DDX39A-201ENST00000242776 GABARAPH6UMI1 98 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 FCGR3AP08637 254 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 TMEM11P17152 192 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 ACTBP60709 375 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 SLC35B1P78383 322 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 LTC4SQ16873 150 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 SLC35E3Q7Z769 313 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 DRAM1Q8N682 238 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 C5orf56Q8N8D9 126 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 FCAMRQ8WWV6 532 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 TOMM40LQ969M1 308 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 RPEQ96AT9 228 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 SOSTQ9BQB4 213 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 HDHD3Q9BSH5 251 aaPredicted RBP10.83□□□□□ -0.68
DDX39A-201ENST00000242776 AKIP1Q9NQ31 210 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 TAS2R3Q9NYW6 316 aa10.83□□□□□ -0.68
DDX39A-201ENST00000242776 ELF5Q9UKW6 265 aaPredicted RBP10.83□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-201ENST00000242776 PTHLHP12272 177 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 GZMHP20718 246 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 PRRX1P54821 245 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 DIAPH2-AS1Q14236 149 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF846Q147U1 533 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 KIR2DS1Q14954 304 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 SRSF7Q16629 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF880Q6PDB4 577 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 HEPN1Q6WQI6 88 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF554Q86TJ5 538 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 STPG2Q8N412 459 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 GDPD1Q8N9F7 314 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 GPX8Q8TED1 209 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 CCDC107Q8WV48 283 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 SMIM4Q8WVI0 70 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 CORO2AQ92828 525 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 ABHD1Q96SE0 405 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 TSC22D3Q99576 134 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF256Q9Y2P7 627 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-201ENST00000242776 DNAH1Q9P2D7 4330 aa10.82□□□□□ -0.68
DDX39A-201ENST00000242776 LY6LH3BQJ8 138 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 GSTZ1O43708 216 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-201ENST00000242776 ORC5O43913 435 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SSX5O60225 188 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 RCVRNP35243 200 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 HLA-DRB3P79483 266 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF79Q15937 498 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 RNASE12Q5GAN4 147 aaKnown RBP10.81□□□□□ -0.68
DDX39A-201ENST00000242776 CCDC144NLQ6NUI1 221 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 FOXRED2Q8IWF2 684 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 Q8N402 240 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 OR13A1Q8NGR1 328 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 MRGPRDQ8TDS7 321 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 LYSTQ99698 3801 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 Q9N2K0 584 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SMAD5-AS1Q9Y6J3 95 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SORL1Q92673 2214 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SPINT2O43291 252 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 RBBP9O75884 186 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 IGKV1D-33P01593 117 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 IGKV1-33P01594 117 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SLC6A1P30531 599 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 GNG10P50151 68 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 LSAMPQ13449 338 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 TMEM30BQ3MIR4 351 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 Q6ZS49 121 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 HOGA1Q86XE5 327 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 MFSD4AQ8N468 514 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 OR8U1Q8NH10 309 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 OR52I2Q8NH67 350 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 CREB3L1Q96BA8 519 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 CYYR1Q96J86 154 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 ST6GALNAC5Q9BVH7 336 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 SRRQ9GZT4 340 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 CALYQ9NYX4 217 aa10.81□□□□□ -0.68
DDX39A-201ENST00000242776 MEIS3P1A6NDR6 274 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 NCBP2LA6PVI3 153 aaKnown RBP10.8□□□□□ -0.68
DDX39A-201ENST00000242776 TRDCB7Z8K6 153 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 GSTT2BP0CG30 244 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 RCC1P18754 421 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-201ENST00000242776 CD40LGP29965 261 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 ARPC4P59998 168 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 HMGN3Q15651 99 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 CXorf66Q5JRM2 361 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms