RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ESCO2Q56NI9 601 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 TCTEX1D1Q8N7M0 179 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 NEIL1Q96FI4 390 aaPredicted RBP12.5□□□□□ -0.41
HDHD3-201ENST00000238379 YLPM1P49750 1951 aaKnown RBP12.5□□□□□ -0.41
HDHD3-201ENST00000238379 AKAP6Q13023 2319 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 A0A0G2JRQ6 117 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 RAMP3O60896 148 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 OR2F2O95006 317 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 PET100P0DJ07 73 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 C4BPBP20851 252 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 DUTP33316 252 aaKnown RBP12.49□□□□□ -0.41
HDHD3-201ENST00000238379 LPAR6P43657 344 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 S100A10P60903 97 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 OR2F1Q13607 317 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 ZNF345Q14585 488 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 C1orf229Q6ZS94 237 aaPredicted RBP12.49□□□□□ -0.41
HDHD3-201ENST00000238379 SLC25A48Q6ZT89 311 aaKnown RBP12.49□□□□□ -0.41
HDHD3-201ENST00000238379 ACOT7LQ6ZUV0 252 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 ODF3L1Q8IXM7 274 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 C11orf42Q8N5U0 333 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 RRNAD1Q96FB5 475 aaKnown RBP12.49□□□□□ -0.41
HDHD3-201ENST00000238379 SPIN2AQ99865 258 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 SPIN2BQ9BPZ2 258 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
HDHD3-201ENST00000238379 FAM212BQ9NTI7 297 aaPredicted RBP12.49□□□□□ -0.41
HDHD3-201ENST00000238379 KCNAB3O43448 404 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 DEDDO75618 318 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 IGKV1-5P01602 117 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 AP2S1P53680 142 aaPredicted RBP12.48□□□□□ -0.41
HDHD3-201ENST00000238379 WDR25Q64LD2 544 aaPredicted RBP12.48□□□□□ -0.41
HDHD3-201ENST00000238379 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 SPAG16Q8N0X2 631 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.48□□□□□ -0.41
HDHD3-201ENST00000238379 OR8B3Q8NGG8 313 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 LSM10Q969L4 123 aaKnown RBP12.48□□□□□ -0.41
HDHD3-201ENST00000238379 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 OR8B2Q96RD0 313 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 A0A0D9SG52 128 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 K7EPK0 472 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 M0R1X1 148 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 RAB29O14966 203 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 GNG10P50151 68 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 OR2B11Q5JQS5 317 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
HDHD3-201ENST00000238379 INO80EQ8NBZ0 244 aaPredicted RBP12.48□□□□□ -0.41
HDHD3-201ENST00000238379 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
HDHD3-201ENST00000238379 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
HDHD3-201ENST00000238379 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
HDHD3-201ENST00000238379 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
HDHD3-201ENST00000238379 SLC25A6P12236 298 aa12.47□□□□□ -0.41
HDHD3-201ENST00000238379 C8orf46Q8TAG6 207 aa12.47□□□□□ -0.41
HDHD3-201ENST00000238379 PATZ1Q9HBE1 687 aaKnown RBP12.47□□□□□ -0.41
HDHD3-201ENST00000238379 PAIP2BQ9ULR5 123 aaKnown RBP12.47□□□□□ -0.41
HDHD3-201ENST00000238379 LSM5Q9Y4Y9 91 aaKnown RBP12.47□□□□□ -0.41
HDHD3-201ENST00000238379 A0A1B0GU03 582 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 MSGN1A6NI15 193 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 ST8SIA3O43173 380 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 PITX3O75364 302 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 RLN2P04090 185 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 GPR6P46095 362 aaPredicted RBP12.46□□□□□ -0.41
HDHD3-201ENST00000238379 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.41
HDHD3-201ENST00000238379 IZUMO4Q1ZYL8 232 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 CXorf66Q5JRM2 361 aaPredicted RBP12.46□□□□□ -0.41
HDHD3-201ENST00000238379 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.41
HDHD3-201ENST00000238379 TEX261Q6UWH6 196 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 Q6ZRM9 215 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 LYG1Q8N1E2 194 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 RAB39BQ96DA2 213 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 POMT1Q9Y6A1 747 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 U3KQ87 197 aa12.46□□□□□ -0.41
HDHD3-201ENST00000238379 A0A087X0M5 115 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 A0A1B0GX30 115 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 F5H0A9 414 aaPredicted RBP12.46□□□□□ -0.42
HDHD3-201ENST00000238379 S1PR2O95136 353 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 IGHV1-8P0DP01 117 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 AKR1C2P52895 323 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 ID3Q02535 119 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 SMCO1Q147U7 214 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 C8orf31Q8N9H6 132 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 OR8H1Q8NGG4 311 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 CD300LFQ8TDQ1 290 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 DDB2Q92466 427 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 AQP10Q96PS8 301 aa12.46□□□□□ -0.42
HDHD3-201ENST00000238379 PPIAL4CA0A0B4J2A2 164 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 P0C879 139 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 EPHA1P21709 976 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms