RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SLC38A11Q08AI6 406 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 TMEM14EPQ6UXP3 125 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 MYPOPQ86VE0 399 aaPredicted RBP13.08□□□□□ -0.32
CTSD-201ENST00000236671 Q8IYB0 196 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 TAF15Q92804 592 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTSD-201ENST00000236671 RBKSQ9H477 322 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 ABI3Q9P2A4 366 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 WIPI2Q9Y4P8 454 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 ELOA3CA0A087WX78 387 aaPredicted RBP13.07□□□□□ -0.32
CTSD-201ENST00000236671 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 RD3LP0DJH9 198 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 CEACAM6P40199 344 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 DCAF10Q5QP82 559 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 WDR25Q64LD2 544 aaPredicted RBP13.07□□□□□ -0.32
CTSD-201ENST00000236671 OR10D4PQ8NGN7 298 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 GPR61Q9BZJ8 451 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 TRBV24-1A0A075B6N3 115 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 PGA5P0DJD9 388 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 ZNF146Q15072 292 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 IGF2-ASQ6U949 168 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 BEND4Q6ZU67 534 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 FGFRL1Q8N441 504 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 NANOS1Q8WY41 292 aaKnown RBP13.07□□□□□ -0.32
CTSD-201ENST00000236671 POLDIP2Q9Y2S7 368 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 TIMM9Q9Y5J7 89 aa13.07□□□□□ -0.32
CTSD-201ENST00000236671 ZNF729A6NN14 1252 aaPredicted RBP13.06□□□□□ -0.32
CTSD-201ENST00000236671 TGOLN2O43493 480 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 IFNA1P01562 189 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 MEOX1P50221 254 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 FAM180AQ6UWF9 173 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 RPP25LQ8N5L8 163 aaKnown RBP13.06□□□□□ -0.32
CTSD-201ENST00000236671 ZNF383Q8NA42 475 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 IGSF10Q6WRI0 2623 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 DNAJC13O75165 2243 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 RNF212BA8MTL3 300 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 CDIPTO14735 213 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 SMPD2O60906 423 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 OPN1MWP04001 364 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 CELA3BP08861 270 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 OPN1MW2P0DN77 364 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 OPN1MW3P0DN78 364 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 CD81P60033 236 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 CHD3Q12873 2000 aaKnown RBP13.06□□□□□ -0.32
CTSD-201ENST00000236671 TBC1D28Q2M2D7 210 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 OR8G2PQ6IF36 304 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 CTDSP1Q9GZU7 261 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 HSPB7Q9UBY9 170 aa13.06□□□□□ -0.32
CTSD-201ENST00000236671 DOCK7Q96N67 2140 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 NKX2-8O15522 239 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 RAMP3O60896 148 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 ZNF737O75373 536 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 NXPH2O95156 264 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
CTSD-201ENST00000236671 CLDN1O95832 211 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 P0C879 139 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 CENPVQ7Z7K6 275 aaPredicted RBP13.05□□□□□ -0.32
CTSD-201ENST00000236671 LHX4Q969G2 390 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 GPR87Q9BY21 358 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 OR2J1Q9GZK6 312 aa13.05□□□□□ -0.32
CTSD-201ENST00000236671 OR5H1A6NKK0 313 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 J3QW42 95 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 ERVS71-1P61550 626 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 C9orf152Q5JTZ5 239 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 SPACA3Q8IXA5 215 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 ZNF645Q8N7E2 425 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 ZCCHC14Q8WYQ9 949 aaKnown RBP13.04□□□□□ -0.32
CTSD-201ENST00000236671 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 NAT8Q9UHE5 227 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 IGHV3-64DA0A0J9YX35 117 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 SH2D1BO14796 132 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 GATCO43716 136 aaKnown RBP13.04□□□□□ -0.32
CTSD-201ENST00000236671 SP1P08047 785 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 PPP1CBP62140 327 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
CTSD-201ENST00000236671 EIF4EBP1Q13541 118 aaPredicted RBP13.04□□□□□ -0.32
CTSD-201ENST00000236671 ALKBH6Q3KRA9 238 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 CYP2G1PQ6ZSU1 146 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.04□□□□□ -0.32
CTSD-201ENST00000236671 OR1L1Q8NH94 360 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 SMIM7Q9BQ49 75 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 PRDM13Q9H4Q3 707 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
CTSD-201ENST00000236671 TLN1Q9Y490 2541 aaKnown RBP13.03□□□□□ -0.32
CTSD-201ENST00000236671 C21orf140B9A014 251 aa13.03□□□□□ -0.32
CTSD-201ENST00000236671 CEBPDP49716 269 aaPredicted RBP13.03□□□□□ -0.32
CTSD-201ENST00000236671 RPL30P62888 115 aaKnown RBP13.03□□□□□ -0.32
CTSD-201ENST00000236671 ZNF766Q5HY98 468 aa13.03□□□□□ -0.32
CTSD-201ENST00000236671 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms