RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 KIAA0141Q14154 515 aaPredicted RBP7.67□□□□□ -1.18
SYDE2-201ENST00000234668 SRSF7Q16629 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
SYDE2-201ENST00000234668 DEFB109BQ30KR1 87 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 GFI1BQ5VTD9 330 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 NECAP1Q8NC96 275 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 GALMQ96C23 342 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 MUCL1Q96DR8 90 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 GMPPAQ96IJ6 420 aaPredicted RBP7.67□□□□□ -1.18
SYDE2-201ENST00000234668 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 NIPSNAP3BQ9BS92 247 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 ZDHHC11Q9H8X9 412 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 AURKAIP1Q9NWT8 199 aaPredicted RBP7.67□□□□□ -1.18
SYDE2-201ENST00000234668 TNCP24821 2201 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 LINC00473A8K010 186 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 APC2O95996 2303 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 CECR9P0C854 216 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 CD200P41217 278 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 SLC38A11Q08AI6 406 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 RHEBQ15382 184 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 Q3ZCU0 254 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 RPRMLQ8N4K4 120 aa7.67□□□□□ -1.18
SYDE2-201ENST00000234668 CSMD1Q96PZ7 3565 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 ABCA1O95477 2261 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 TRBV23-1A0A0A0MS06 115 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 TRBV6-6A0A0A6YYG2 114 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 ODAMA1E959 279 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 CLN5O75503 358 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 DFFBO76075 338 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 SELLP14151 372 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 FOLR2P14207 255 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 ZNF146Q15072 292 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 MSMPQ1L6U9 139 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 CDPF1Q6NVV7 123 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 RPP25LQ8N5L8 163 aaKnown RBP7.66□□□□□ -1.18
SYDE2-201ENST00000234668 WDR31Q8NA23 367 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 OR2Z1Q8NG97 314 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 OPA3Q9H6K4 179 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 LINC00587B1AMM8 73 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 PRSS44E7EML9 344 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 GALR2O43603 387 aaPredicted RBP7.66□□□□□ -1.18
SYDE2-201ENST00000234668 TRGC2P03986 189 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 RAC2P15153 192 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 EGR1P18146 543 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 HOXC12P31275 282 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 TFF3Q07654 80 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 ELOBQ15370 118 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 GCSAMLQ5JQS6 135 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 HEPN1Q6WQI6 88 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 SPNS3Q6ZMD2 512 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 IL22RA2Q969J5 263 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 RPUSD4Q96CM3 377 aaKnown RBP7.66□□□□□ -1.18
SYDE2-201ENST00000234668 TVP23CQ96ET8 276 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 SVEP1Q4LDE5 3571 aa7.66□□□□□ -1.18
SYDE2-201ENST00000234668 DUXBA0A1W2PPF3 345 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 S100A9P06702 114 aaKnown RBP7.65□□□□□ -1.18
SYDE2-201ENST00000234668 MDH2P40926 338 aaKnown RBP7.65□□□□□ -1.18
SYDE2-201ENST00000234668 ZNF83P51522 516 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 ZNF506Q5JVG8 444 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 ACSM6Q6P461 480 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 WDR82Q6UXN9 313 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 LINC00596Q86U02 117 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 ZNRF1Q8ND25 227 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 NINJ1Q92982 152 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 LHX4Q969G2 390 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 MBNL3Q9NUK0 354 aaKnown RBP7.65□□□□□ -1.18
SYDE2-201ENST00000234668 SLC39A9Q9NUM3 307 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 LIN7CQ9NUP9 197 aaKnown RBP7.65□□□□□ -1.18
SYDE2-201ENST00000234668 LOC102723971A0A1B0GUV8 181 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 TMEM30CPA0ZSE6 113 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 IFNA4P05014 189 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 TNFRSF9Q07011 255 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 RNF212Q495C1 297 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 WDR25Q64LD2 544 aaPredicted RBP7.65□□□□□ -1.18
SYDE2-201ENST00000234668 FAM90A2PQ658T7 463 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 Q6ZT83 130 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 DEFB108BQ8NET1 73 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 LRRC29Q8WV35 223 aa7.65□□□□□ -1.18
SYDE2-201ENST00000234668 MAP1LC3B2A6NCE7 125 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 IQCF6A8MYZ5 107 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 LRRC75BQ2VPJ9 315 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 NCR3LG1Q68D85 454 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 ACP7Q6ZNF0 438 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 CD177Q8N6Q3 437 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 OR8G5Q8NG78 346 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 TAF15Q92804 592 aaKnown RBP eCLIP7.65□□□□□ -1.19
SYDE2-201ENST00000234668 TMEM204Q9BSN7 226 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 MAP1LC3BQ9GZQ8 125 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 WDR61Q9GZS3 305 aaKnown RBP7.65□□□□□ -1.19
SYDE2-201ENST00000234668 TUBA4BQ9H853 241 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 CLCF1Q9UBD9 225 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 WIPI2Q9Y4P8 454 aa7.65□□□□□ -1.19
SYDE2-201ENST00000234668 BSNQ9UPA5 3926 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 AP4M1O00189 453 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 UBE2CO00762 179 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 HSPB1P04792 205 aaKnown RBP7.64□□□□□ -1.19
SYDE2-201ENST00000234668 CEACAM1P13688 526 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 TUBG1P23258 451 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 EDDM3BP56851 147 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 HBG1P69891 147 aa7.64□□□□□ -1.19
SYDE2-201ENST00000234668 HBG2P69892 147 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms