RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 KCNS1Q96KK3 526 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 LYRM4Q9HD34 91 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 REG1AP05451 166 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 CD22P20273 847 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 ARAP2Q8WZ64 1704 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 A6NNC1 897 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 A8MWL6 223 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 NMBP08949 121 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
MSH6-201ENST00000234420 IGHV4-39P01824 125 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 NXPH1P58417 271 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 STARD6P59095 220 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 TMEM52BQ4KMG9 183 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 PABPC1L2AQ5JQF8 200 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 OR4D5Q8NGN0 318 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 PP6455Q8WZ26 134 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 RBM38Q9H0Z9 239 aaKnown RBP9.7□□□□□ -0.86
MSH6-201ENST00000234420 V9GYH0 126 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 A0A1B0GU03 582 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 ARRDC5A6NEK1 342 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 LYZL2Q7Z4W2 148 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 C1orf174Q8IYL3 243 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 KIAA2026Q5HYC2 2103 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 AMY1AP04745 511 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 KRTCAP3Q53RY4 240 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 FAM216AQ8WUB2 273 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.7□□□□□ -0.86
MSH6-201ENST00000234420 PSG6Q00889 435 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 RUNX1Q01196 453 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 OTOSQ8NHW6 89 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
MSH6-201ENST00000234420 PLSCR4Q9NRQ2 329 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 DOPEY2Q9Y3R5 2298 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 NKX2-6A6NCS4 301 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 C1QL1O75973 258 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 TNFSF10P50591 281 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 TNFRSF9Q07011 255 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 APOBEC3DQ96AK3 386 aaPredicted RBP9.7□□□□□ -0.86
MSH6-201ENST00000234420 HLA-DQA1P01909 254 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 FAM53AQ6NSI3 398 aaPredicted RBP9.7□□□□□ -0.86
MSH6-201ENST00000234420 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 MAP1LC3AQ9H492 121 aa9.7□□□□□ -0.86
MSH6-201ENST00000234420 TMEM189A5PLL7 270 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 TMEM189-UBE2V1I3L0A0 370 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 LINC00614P0C842 121 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 OR5AN1Q8NGI8 311 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 GPBAR1Q8TDU6 330 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 DOK1Q99704 481 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 ALX4Q9H161 411 aaPredicted RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 GPR27Q9NS67 375 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 PLXNA1Q9UIW2 1896 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 PPIAL4DF5H284 164 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 WFDC12Q8WWY7 111 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 TMEFF2Q9UIK5 374 aaPredicted RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 S4R3C0 116 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 CD33P20138 364 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 GNG3P63215 75 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 LHFPL4Q7Z7J7 247 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 OR10J6PQ8NGY7 276 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 HIST1H2BAQ96A08 127 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 MS4A6EQ96DS6 147 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 RSPO3Q9BXY4 272 aaPredicted RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 OR2A4O95047 310 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 HPRT1P00492 218 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 MALP21145 153 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 SLC25A42Q86VD7 318 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 COPS9Q8WXC6 57 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 OR2A7Q96R45 310 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 WDR54Q9H977 334 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 IGHV5-10-1A0A0J9YXX1 117 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 ZNF729A6NN14 1252 aaPredicted RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 CGB3P0DN86 165 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
MSH6-201ENST00000234420 SNAI3Q3KNW1 292 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 Q8WTZ3 238 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 DAPP1Q9UN19 280 aa9.69□□□□□ -0.86
MSH6-201ENST00000234420 COL9A1P20849 921 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 MFAP4P55083 255 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 FMODQ06828 376 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 EIF3IQ13347 325 aaKnown RBP9.68□□□□□ -0.86
MSH6-201ENST00000234420 H1FOOQ8IZA3 346 aaPredicted RBP9.68□□□□□ -0.86
MSH6-201ENST00000234420 C17orf47Q8NEP4 570 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 C18orf15Q96N68 181 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 NEURL4Q96JN8 1562 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 ZNF32P17041 273 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 PDLIM4P50479 330 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 LAMTOR1Q6IAA8 161 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 PRSS41Q7RTY9 318 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms