RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 ZNF611Q8N823 705 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 TAF15Q92804 592 aaKnown RBP eCLIP11.94□□□□□ -0.51e-8■■□□□ 12.7
SF1-201ENST00000227503 WDYHV1Q96HA8 205 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 BTF3L4Q96K17 158 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 C20orf144Q9BQM9 153 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.59e-11■■■■■ 27.3
SF1-201ENST00000227503 CRYABP02511 175 aaKnown RBP11.94□□□□□ -0.5
SF1-201ENST00000227503 WNT2P09544 360 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 ATP5G3P48201 142 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 FFAR4Q5NUL3 377 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 C20orf204Q6ZNR8 217 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 ATOH7Q8N100 152 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 OR1F12Q8NHA8 337 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 SLC35E1Q96K37 410 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 SGCZQ96LD1 299 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 OR51B6Q9H340 312 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 PTRH2Q9Y3E5 179 aaKnown RBP11.94□□□□□ -0.5
SF1-201ENST00000227503 C20orf202A1L168 122 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 CLEC18AA5D8T8 446 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 BCL3P20749 454 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 COMPP49747 757 aaPredicted RBP11.93□□□□□ -0.5
SF1-201ENST00000227503 TFF3Q07654 80 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 IL11RAQ14626 422 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 KRTAP27-1Q3LI81 207 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 LYSMD4Q5XG99 296 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 CLEC18CQ8NCF0 446 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 PPP1R3CQ9UQK1 317 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 DUXBA0A1W2PPF3 345 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 SPINK4O60575 86 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 TYMSP04818 313 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 OR5G3P0C626 314 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 B3GALT5-AS1P59052 145 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 SLC38A11Q08AI6 406 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 CNN3Q15417 329 aaKnown RBP11.93□□□□□ -0.5
SF1-201ENST00000227503 SPINK9Q5DT21 86 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 ANAPC16Q96DE5 110 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 SF3B5Q9BWJ5 86 aaKnown RBP11.93□□□□□ -0.5
SF1-201ENST00000227503 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
SF1-201ENST00000227503 CRIM1Q9NZV1 1036 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 FBXL7Q9UJT9 491 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 RNF24Q9Y225 148 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 OR6C6A6NF89 314 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 CBR3O75828 277 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 NDUFB4O95168 129 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 F2RP25116 425 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
SF1-201ENST00000227503 IGFBP7Q16270 282 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 TMEM211Q6ICI0 200 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 OR10G9Q8NGN4 311 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 OR10G7Q8NGN6 311 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 TMEM38BQ9NVV0 291 aa11.93□□□□□ -0.5
SF1-201ENST00000227503 CD300LBA8K4G0 201 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 IGKV1-5P01602 117 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 PI4KAP42356 2102 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 RPS19BP1Q86WX3 136 aaKnown RBP11.92□□□□□ -0.5
SF1-201ENST00000227503 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 PSMG3Q9BT73 122 aaPredicted RBP11.92□□□□□ -0.5
SF1-201ENST00000227503 CLDN1O95832 211 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 ZNF32P17041 273 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 HINT1P49773 126 aaPredicted RBP11.92□□□□□ -0.5
SF1-201ENST00000227503 RAC3P60763 192 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 GNB1P62873 340 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 TGFBR3Q03167 851 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 LHFPL2Q6ZUX7 228 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 RAB40CQ96S21 281 aa11.92□□□□□ -0.5
SF1-201ENST00000227503 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
SF1-201ENST00000227503 A0A0G2JMM0 328 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 A0A1W2PPB8 328 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 A0A1W2PRS3 328 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 KIR3DP1A8MWS1 328 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 H0Y980 276 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 SLC17A3O00476 420 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 B4GALT1P15291 398 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 TPPP2P59282 170 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 ZXDAP98168 799 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 BAGE3Q86Y29 109 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 AGBL5Q8NDL9 886 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
SF1-201ENST00000227503 ABHD14BQ96IU4 210 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 ZNF488Q96MN9 340 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 ALKBH3Q96Q83 286 aaPredicted RBP11.91□□□□□ -0.5
SF1-201ENST00000227503 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 OR1A1Q9P1Q5 309 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 TP73-AS1Q9UF72 201 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 ZNF716A6NP11 495 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 M0QZ24 198 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 SIRPB1O00241 398 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms