RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ZNF418Q8TF45 676 aaPredicted RBP10.65□□□□□ -0.7
TIMP1-201ENST00000218388 C17orf50Q8WW18 174 aa10.65□□□□□ -0.7
TIMP1-201ENST00000218388 AKR1E2Q96JD6 320 aa10.65□□□□□ -0.7
TIMP1-201ENST00000218388 SCGB3A2Q96PL1 93 aa10.65□□□□□ -0.7
TIMP1-201ENST00000218388 MEGF9Q9H1U4 602 aa10.65□□□□□ -0.7
TIMP1-201ENST00000218388 IGHV1-3A0A0C4DH29 117 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 LINC00854A0A1B0GVQ3 168 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 OR5H14A6NHG9 310 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 M0R1X1 148 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF735P0CB33 412 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 REG1BP48304 166 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 SURF2Q15527 256 aaPredicted RBP10.64□□□□□ -0.71
TIMP1-201ENST00000218388 LRRC75BQ2VPJ9 315 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 RPL39P5Q59GN2 51 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 LDLRAD2Q5SZI1 272 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 C16orf87Q6PH81 154 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 IDO2Q6ZQW0 420 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 MOB3BQ86TA1 216 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 LHFPL1Q86WI0 220 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 ZFAND1Q8TCF1 268 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 AJUBAQ96IF1 538 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 ADTRPQ96IZ2 230 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 FXYD6Q9H0Q3 95 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 DPAGT1Q9H3H5 408 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 PRDM13Q9H4Q3 707 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 SDHAF2Q9NX18 166 aa10.64□□□□□ -0.71
TIMP1-201ENST00000218388 A0A1W2PPI3 338 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 VGLL3A8MV65 326 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 GPR31O00270 319 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 LYRM1O43325 122 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 THBS3P49746 956 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 DYNLT3P51808 116 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 DEFA1P59665 94 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 DEFA3P59666 94 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 TAGLNQ01995 201 aaKnown RBP10.63□□□□□ -0.71
TIMP1-201ENST00000218388 CBX3Q13185 183 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 DIAPH2-AS1Q14236 149 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 ABCA11PQ4W5N1 156 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 AADACL3Q5VUY0 350 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 MZT2BQ6NZ67 158 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 Q6YL49 198 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF66Q6ZN08 573 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 DYNAPQ8N1N2 210 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 DRAM1Q8N682 238 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 SIGLECL1Q8N7X8 197 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 OR5R1Q8NH85 324 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 SSMEM1Q8WWF3 244 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF486Q96H40 463 aaPredicted RBP10.63□□□□□ -0.71
TIMP1-201ENST00000218388 JMJD8Q96S16 334 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 HSD17B10Q99714 261 aaKnown RBP10.63□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF251Q9BRH9 671 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 MRPL20Q9BYC9 149 aaKnown RBP10.63□□□□□ -0.71
TIMP1-201ENST00000218388 CCL28Q9NRJ3 127 aa10.63□□□□□ -0.71
TIMP1-201ENST00000218388 C14orf166Q9Y224 244 aaKnown RBP10.63□□□□□ -0.71
TIMP1-201ENST00000218388 NSD1Q96L73 2696 aaPredicted RBP10.63□□□□□ -0.71
TIMP1-201ENST00000218388 MDFIC2A0A1B0GVS7 189 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 RNF212BA8MTL3 300 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 TIMM23O14925 209 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 APOA2P02652 100 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 GNRHRP30968 328 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 MC5RP33032 325 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 RAB13P51153 203 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 CATR1Q13166 79 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 BVESQ8NE79 360 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF48Q96MX3 618 aaPredicted RBP10.62□□□□□ -0.71
TIMP1-201ENST00000218388 SSX3Q99909 188 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 NABP2Q9BQ15 211 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 SLC25A21Q9BQT8 299 aaPredicted RBP10.62□□□□□ -0.71
TIMP1-201ENST00000218388 RSRP1Q9BUV0 290 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 PRELID3BQ9Y3B1 194 aa10.62□□□□□ -0.71
TIMP1-201ENST00000218388 SOX21Q9Y651 276 aaPredicted RBP10.62□□□□□ -0.71
TIMP1-201ENST00000218388 A0A0A6YYJ9 748 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 IFNA2P01563 188 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 FAM106CPP0CH98 169 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 CT45A6P0DMU7 189 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 CT45A5P0DMU8 189 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 CT45A7P0DMV0 189 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 RRASP10301 218 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 CD1BP29016 333 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 DUTP33316 252 aaKnown RBP10.61□□□□□ -0.71
TIMP1-201ENST00000218388 BAMBIQ13145 260 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 ASAH1Q13510 395 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 HABP2Q14520 560 aaPredicted RBP10.61□□□□□ -0.71
TIMP1-201ENST00000218388 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
TIMP1-201ENST00000218388 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF818PQ6ZRF7 136 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 KCTD9Q7L273 389 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 THNSL2Q86YJ6 484 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 TMEM86BQ8N661 226 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 OR13C8Q8NGS7 320 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 MARCH1Q8TCQ1 289 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 CAPSLQ8WWF8 208 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 PALMDQ9NP74 551 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 PITPNC1Q9UKF7 332 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
TIMP1-201ENST00000218388 MTORP42345 2549 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 FN1P02751 2386 aaKnown RBP10.6□□□□□ -0.71
TIMP1-201ENST00000218388 H3BUX3 64 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms