RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 IGSF23A1L1A6 192 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 C17orf98A8MV24 154 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 TOR1AO14656 332 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 SYNGR2O43760 224 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 PLAUP00749 431 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 ZNF672Q499Z4 452 aaPredicted RBP14.41□□□□□ -0.1
VRK1-201ENST00000216639 MUC15Q8N387 334 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 SAT2Q96F10 170 aaPredicted RBP14.41□□□□□ -0.1
VRK1-201ENST00000216639 ABHD14AQ9BUJ0 271 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 ARV1Q9H2C2 271 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 GAL3ST2Q9H3Q3 398 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 LINC00574Q9H8X3 128 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 TAS2R3Q9NYW6 316 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 LINC00312Q9Y6C7 94 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 WSB1Q9Y6I7 421 aa14.41□□□□□ -0.1
VRK1-201ENST00000216639 RAI1Q7Z5J4 1906 aaPredicted RBP14.4□□□□□ -0.1
VRK1-201ENST00000216639 IGHV1-69-2A0A0G2JMI3 117 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 ZNF705EA8MWA4 302 aaPredicted RBP14.4□□□□□ -0.1
VRK1-201ENST00000216639 NDUFB3O43676 98 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 KRASP01116 189 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 FGF2P09038 288 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 IZUMO4Q1ZYL8 232 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 STX12Q86Y82 276 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.4□□□□□ -0.1
VRK1-201ENST00000216639 OR10A7Q8NGE5 316 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 BSCL2Q96G97 398 aaPredicted RBP14.4□□□□□ -0.1
VRK1-201ENST00000216639 LPAR3Q9UBY5 353 aa14.4□□□□□ -0.1
VRK1-201ENST00000216639 DSCAMO60469 2012 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 IGF2RP11717 2491 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 KIAA1324LA8MWY0 1029 aaPredicted RBP14.39□□□□□ -0.11
VRK1-201ENST00000216639 NUDT19A8MXV4 375 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 M0R1X1 148 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 NDUFA2O43678 99 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 MED6O75586 246 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 S1PR2O95136 353 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 SEC11BP0C7V7 166 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 FAM157CP0CG43 387 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 DUTP33316 252 aaKnown RBP14.39□□□□□ -0.11
VRK1-201ENST00000216639 G6PCP35575 357 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 KIR2DS2P43631 304 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 SWI5Q1ZZU3 235 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 HFEQ30201 348 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 LRRC10Q5BKY1 277 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 GINS3Q9BRX5 216 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 IFI27L2Q9H2X8 130 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 WFDC1Q9HC57 220 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 PRELID3BQ9Y3B1 194 aa14.39□□□□□ -0.11
VRK1-201ENST00000216639 LINC00473A8K010 186 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 RAB29O14966 203 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 FBXO24O75426 580 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 NFYBP25208 207 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 SULT1A2P50226 295 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 RPL31P62899 125 aaKnown RBP14.38□□□□□ -0.11
VRK1-201ENST00000216639 CDSNQ15517 529 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 TCF23Q7RTU1 214 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 H2BFWTQ7Z2G1 175 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.38□□□□□ -0.11
VRK1-201ENST00000216639 CACNA1DQ01668 2161 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 PLCE1Q9P212 2302 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 TLN1Q9Y490 2541 aaKnown RBP14.38□□□□□ -0.11
VRK1-201ENST00000216639 A8MXK9 166 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 KRBOX1C9JBD0 128 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 TMEM50AO95807 157 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 HPRT1P00492 218 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 ZNF134P52741 427 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 PAX9P55771 341 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 TAS2R30P59541 319 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 BLOC1S1P78537 153 aa14.38□□□□□ -0.11
VRK1-201ENST00000216639 POLEQ07864 2286 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 PCNX1Q96RV3 2341 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 TEX46H3BTG2 121 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 RBFOX2O43251 390 aaKnown RBP eCLIP14.37□□□□□ -0.11
VRK1-201ENST00000216639 SIAH2O43255 324 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 ZP3P21754 424 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 BRWD1-AS2P59051 145 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 NCR3LG1Q68D85 454 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 CCDC28AQ8IWP9 274 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 OR1S2Q8NGQ3 325 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 OR5C1Q8NGR4 320 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 MARC2Q969Z3 335 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 SMIM8Q96KF7 97 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 S1PR3Q99500 378 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 TMEM204Q9BSN7 226 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 PSENENQ9NZ42 101 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 KAAG1Q9UBP8 84 aa14.37□□□□□ -0.11
VRK1-201ENST00000216639 RAB19A4D1S5 217 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 B8ZZF3 427 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 TNFRSF13BO14836 293 aaPredicted RBP14.36□□□□□ -0.11
VRK1-201ENST00000216639 TXNL1O43396 289 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 FCGR3BO75015 233 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 DFFBO76075 338 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 CST7O76096 145 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 IGHV3-7P01780 117 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 P0C879 139 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 SULT1A1P50225 295 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 PPOXP50336 477 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 UBE2KP61086 200 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 CLINT1Q14677 625 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 CT45A1Q5HYN5 189 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 CT45A3Q8NHU0 189 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms