RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Abhd16aQ9Z1Q2 558 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Scn2aA0A0J9YTW6 2006 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Mdh2P08249 338 aaKnown RBP7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dusp1P28563 367 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 NodalP43021 354 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Znf48Q3US17 591 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm813Q3UWK9 176 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Eml2Q7TNG5 649 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tssk5Q8C1R0 372 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1324Q8VEU7 332 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr101Q920Z0 308 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dnajc4Q9D844 244 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tmem38bQ9DAV9 292 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Erv3Q9DAX3 200 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm13547A2ARC0 163 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Prrt2E9PUL5 346 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Irf2bp2E9Q1P8 570 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm5039J3QNT6 144 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 CckarO08786 436 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ntn1O09118 604 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 P2ry1P49650 373 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ear2P97425 156 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 BaxQ07813 192 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Cnep1r1Q3UJ81 125 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1341Q7TQV4 312 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr193Q7TS43 309 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Megf9Q8BH27 600 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Mef2cQ8CFN5 474 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1260Q8VGN9 310 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Eva1aQ91WM6 156 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ctag2Q9D9S4 219 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Smdt1Q9DB10 107 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Btbd17Q9DB72 478 aa7.79□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Siva1O54926 175 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 P01654 111 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 P01656 111 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 P03977 111 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Sox18P43680 377 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Crebl2Q32M00 123 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Znf488Q5HZG9 337 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Trp53rkaQ5U452 244 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Kcnip4Q6PHZ8 250 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dzank1Q8C008 778 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Phospho1Q8R2H9 267 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1270Q8VGP3 304 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Pofut1Q91ZW2 393 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 PecrQ99MZ7 303 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tp53rkQ99PW4 244 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Rnf151Q9CQ29 239 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tmem175Q9CXY1 499 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tmbim7Q9D592 302 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Lypd6bQ9D7F2 191 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 PaplnQ9EPX2 1280 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Cldn14Q9Z0S3 239 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Lrrk2Q5S006 2527 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Igkv12-44A0A140T8M2 115 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ankrd65F6YK91 380 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Cdhr4H3BJZ2 783 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hmgb3O54879 200 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 B2mP01887 119 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ifna9P09235 190 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Plscr4P58196 326 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Fgf11P70378 225 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Zcwpw2Q08EN7 125 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 PjvkQ0ZLH2 352 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Znf664Q4VA44 261 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Cd55Q61475 390 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gpbar1Q80SS6 329 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hes7Q8BKT2 225 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1368Q8VFG3 314 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr916Q8VG53 310 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1339Q8VGB1 315 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Mrgpra8Q91ZC4 305 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Mid1ip1Q9CQ20 182 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ergic1Q9DC16 290 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gnpnat1Q9JK38 184 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Fxyd1Q9Z239 92 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Adamts9E9PUN6 1931 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Igkv4-86A0A0G2JGE7 114 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm13723A0A1L1SUP2 315 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Fut9O88819 359 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 CtgfP29268 348 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Slc25a4P48962 298 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ackr3P56485 362 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Rnd3P61588 244 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 SeboxP70368 190 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr125Q14AJ9 320 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 A3galt2Q3V1N9 370 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Wfdc5Q4KXB6 126 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 CstbQ62426 98 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Btf3Q64152 204 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dppa1Q810Y7 116 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dusp28Q8BTR5 163 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vmn1r212Q8R268 357 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr361Q8VF16 322 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Rbms1Q91W59 403 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gar1Q9CY66 231 aaKnown RBP7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Emc4Q9CZX9 183 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Q9DAF8 208 aa7.78□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Barx1Q9ER42 254 aa7.78□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms