RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SIP14410 1827 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ITGB4P16144 1822 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZDBF2Q9HCK1 2354 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 RNF222A6NCQ9 220 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 OR2T8A6NH00 312 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF195O14628 629 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 EEDO75530 441 aaKnown RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 POLR2JP52435 117 aaKnown RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM91Q6ZNR0 172 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 RNF166Q96A37 237 aaPredicted RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 RPEQ96AT9 228 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 CST11Q9H112 138 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 FBXL15Q9H469 300 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 SIX2Q9NPC8 291 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 TCRBV7S2A1N4TA0A589 114 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 RBFOX3A6NFN3 312 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF860A6NHJ4 632 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF17P17021 662 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 Q6ZRG5 221 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 Q6ZUT4 128 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 TMEFF1Q8IYR6 380 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 SUMF1Q8NBK3 374 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 NUS1Q96E22 293 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZMYND19Q96E35 227 aaPredicted RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 PELI1Q96FA3 418 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 DEFB118Q96PH6 123 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 METRNQ9UJH8 293 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 MRC1P22897 1456 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 NPIPB6E9PJ23 425 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 DUS4LO95620 317 aaKnown RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 TIMP1P01033 207 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 COL8A1P27658 744 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZFP36L2P47974 494 aaKnown RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF101Q8IZC7 436 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF488Q96MN9 340 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 HCAR1Q9BXC0 346 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 LHX3Q9UBR4 397 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 POLR1DQ9Y2S0 133 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 F5P12259 2224 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 CLDN11O75508 207 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 GPANK1O95872 356 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 CATP04040 527 aaKnown RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 IL3P08700 152 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 PTHLHP12272 177 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 CCR2P41597 374 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM50BP56557 158 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 VAX1Q5SQQ9 334 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
SCN3A-209ENST00000639244 FGFRL1Q8N441 504 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 RNF175Q8N4F7 328 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 IL36AQ9UHA7 158 aa3.72□□□□□ -1.81
SCN3A-209ENST00000639244 FRMPD1Q5SYB0 1578 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 NWD2Q9ULI1 1742 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 A0A087X0K7 114 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 A0A1W2PP11 408 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 ARRDC5A6NEK1 342 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 C2CD4BA6NLJ0 364 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 CDC42EP2O14613 210 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 GSTZ1O43708 216 aaPredicted RBP3.71□□□□□ -1.81
SCN3A-209ENST00000639244 GRPP07492 148 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 ACP5P13686 325 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 RPL38P63173 70 aaKnown RBP3.71□□□□□ -1.81
SCN3A-209ENST00000639244 PRSS36Q5K4E3 855 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 SPATA31B1PQ5VZV4 182 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 MOB3BQ86TA1 216 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 LINC00471Q8N535 108 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 PTGR2Q8N8N7 351 aaPredicted RBP3.71□□□□□ -1.81
SCN3A-209ENST00000639244 OR4K13Q8NH42 304 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 NRTNQ99748 197 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 IL23AQ9NPF7 189 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 RABAC1Q9UI14 185 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 DIP2CQ9Y2E4 1556 aa3.71□□□□□ -1.81
SCN3A-209ENST00000639244 CDC14CA4D256 554 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 FRG2CA6NGY1 282 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 RER1O15258 196 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 RENP00797 406 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 IGHG4P01861 327 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 PRTN3P24158 256 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 FKBP1BP68106 108 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 LRRC37A5PQ49AS3 106 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 MORN3Q6PF18 240 aaPredicted RBP3.71□□□□□ -1.82
SCN3A-209ENST00000639244 MEX3DQ86XN8 651 aaKnown RBP3.71□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM25Q86YD3 366 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 DEFB106AQ8N104 65 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 WDR31Q8NA23 367 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 OR4A5Q8NH83 315 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM37Q8WXS4 190 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 RBMXL1Q96E39 390 aaKnown RBP3.71□□□□□ -1.82
SCN3A-209ENST00000639244 HSD17B10Q99714 261 aaKnown RBP3.71□□□□□ -1.82
SCN3A-209ENST00000639244 SFXN3Q9BWM7 321 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 DSCAML1Q8TD84 2053 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 TRGV10A0A0A0MS01 117 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 TSPAN11A1L157 253 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 MSMO1Q15800 293 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 TSPO2Q5TGU0 170 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 SYNPRQ8TBG9 265 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF681Q96N22 645 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 PKIGQ9Y2B9 76 aa3.71□□□□□ -1.82
SCN3A-209ENST00000639244 A0A087WUU8 490 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms