RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 RNASE1P07998 156 aaKnown RBP13.26□□□□□ -0.29
UBE3A-227ENST00000638011 CEACAM16Q2WEN9 425 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 C2orf83Q53S99 150 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 BHLHA15Q7RTS1 189 aaPredicted RBP13.26□□□□□ -0.29
UBE3A-227ENST00000638011 METTL26Q96S19 204 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 FLRT3Q9NZU0 649 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 ODAMA1E959 279 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 ARSAP15289 507 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 MPLP40238 635 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 CKS1BP61024 79 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 POC1AQ8NBT0 407 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 MRGPRFQ96AM1 343 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 KIAA1549Q9HCM3 1950 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 NDUFB4O95168 129 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 TMEM108Q6UXF1 575 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 LRTM2Q8N967 370 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 GAGE2BQ13066 116 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 GAGE2EQ4V326 116 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 TMEM177Q53S58 311 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 BATF2Q8N1L9 274 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 CLEC5AQ9NY25 188 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 GAGE2DQ9UEU5 116 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 PLXNA2O75051 1894 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 RCC1P18754 421 aaPredicted RBP13.26□□□□□ -0.29
UBE3A-227ENST00000638011 TRMT61AQ96FX7 289 aaKnown RBP13.26□□□□□ -0.29
UBE3A-227ENST00000638011 KCNE3Q9Y6H6 103 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 SIPA1L1O43166 1804 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 TRAV8-7A0A075B6U6 113 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 ALG1L2C9J202 215 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 CD27P26842 260 aa13.26□□□□□ -0.29
UBE3A-227ENST00000638011 CUL9Q8IWT3 2517 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 TRBV5-4A0A0C4DH59 114 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 GAPTQ8N292 157 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 ABHD3Q8WU67 409 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 DHCR7Q9UBM7 475 aaKnown RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 EMDP50402 254 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 OTPQ5XKR4 325 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 ZNF660Q6AZW8 331 aaPredicted RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 C10orf111Q8N326 155 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 OR4A5Q8NH83 315 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RHNO1Q9BSD3 238 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RBMY1BA6NDE4 496 aaKnown RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RBMY1EA6NEQ0 496 aaKnown RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RBMY1DP0C7P1 496 aaKnown RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 ZNF441Q8N8Z8 693 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 CARHSP1Q9Y2V2 147 aaKnown RBP13.25□□□□□ -0.29
UBE3A-227ENST00000638011 PRICKLE4Q2TBC4 344 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 MESTQ5EB52 335 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 EML2O95834 649 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 TIMM23BQ5SRD1 257 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 HOGA1Q86XE5 327 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 GPR35Q9HC97 309 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 TMEM30BQ3MIR4 351 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 HARBI1Q96MB7 349 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 SFXN3Q9BWM7 321 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 PGPEP1Q9NXJ5 209 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 OVOL2Q9BRP0 275 aa13.25□□□□□ -0.29
UBE3A-227ENST00000638011 OR2A4O95047 310 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 HPRT1P00492 218 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 MRPL43Q8N983 215 aaKnown RBP13.24□□□□□ -0.29
UBE3A-227ENST00000638011 OR2A7Q96R45 310 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 A0A1B0GTH9 108 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 GPX4P36969 197 aaPredicted RBP13.24□□□□□ -0.29
UBE3A-227ENST00000638011 FAM222BQ8WU58 562 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 ASB5Q8WWX0 329 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 TIMP4Q99727 224 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 AGERQ15109 404 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 IMMP2LQ96T52 175 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 SMOC1Q9H4F8 434 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 TMEM222Q9H0R3 208 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 TINAGQ9UJW2 476 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 ZNF257Q9Y2Q1 563 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 PXMP4Q9Y6I8 212 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
UBE3A-227ENST00000638011 NKX2-2O95096 273 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 RNFT1Q5M7Z0 435 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 LTB4R2Q9NPC1 389 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 COA4Q9NYJ1 87 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 J3QR06 171 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 ASIPP42127 132 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 LILRA5A6NI73 299 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 MRPS11P82912 194 aaKnown RBP13.24□□□□□ -0.29
UBE3A-227ENST00000638011 LYPD8Q6UX82 237 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
UBE3A-227ENST00000638011 CTSSP25774 331 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 ZNF137PP52743 207 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 SBF1O95248 1867 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 TRAV39A0A0B4J263 110 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 IGHV4-34P06331 123 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 FBLN7Q53RD9 439 aa13.23□□□□□ -0.29
UBE3A-227ENST00000638011 DEFB108BQ8NET1 73 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms