RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 LIN7CQ9NUP9 197 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 KLF2Q9Y5W3 355 aaPredicted RBP8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 A0A0G2JRQ6 117 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 MFSD2BA6NFX1 497 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 FCGR3BO75015 233 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 TIMP3P35625 211 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 DYNLT3P51808 116 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 TMEM88Q6PEY1 159 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 CD177Q8N6Q3 437 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 LRRC46Q96FV0 321 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 C18orf12Q96KH6 178 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 SLC25A31Q9H0C2 315 aa8.13□□□□□ -1.11
CACNA1A-248ENST00000637774 KRBOX1C9JBD0 128 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 TAAR5O14804 337 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 RAMP3O60896 148 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 IFNA5P01569 189 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 NHLH1Q02575 133 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 GUSBP1Q15486 140 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 DUX4L9Q6RFH8 374 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 C11orf53Q8IXP5 236 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 Q8NFD4 153 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 COQ2Q96H96 371 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 CYTL1Q9NRR1 136 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 POMT1Q9Y6A1 747 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 ZZEF1O43149 2961 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 TUBAL3A6NHL2 446 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 CCL21O00585 134 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 CDS2O95674 445 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 ERVFRD-1P60508 538 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 ERVK11-1P61568 191 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 S100A12P80511 92 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 SRSF4Q08170 494 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 TESK1Q15569 626 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 EIF2S3LQ2VIR3 472 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 THNSL2Q86YJ6 484 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 GCSAMQ8N6F7 178 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 TMEM252Q8N6L7 170 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 TMEM171Q8WVE6 324 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 PIGMQ9H3S5 423 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 AUP1Q9Y679 476 aa8.12□□□□□ -1.11
CACNA1A-248ENST00000637774 ODAMA1E959 279 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 H0Y980 276 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 CLDN14O95500 239 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 KITLGP21583 273 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 H2BFWTQ7Z2G1 175 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 LDLRAD3Q86YD5 345 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 VKORC1L1Q8N0U8 176 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 FGFRL1Q8N441 504 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 FAM216BQ8N7L0 139 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 PSENENQ9NZ42 101 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 RNF7Q9UBF6 113 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 GPR37O15354 613 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 IGLV1-44P01699 117 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 UCP1P25874 307 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 AKR1D1P51857 326 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 OR2B8PP59922 312 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 ZNF273Q14593 569 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 MIDNQ504T8 468 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 AKR1C8PQ5T2L2 129 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 LYG1Q8N1E2 194 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 SAP30LQ9HAJ7 183 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 RHOFQ9HBH0 211 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 LPAR3Q9UBY5 353 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 TUBD1Q9UJT1 453 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 RAB19A4D1S5 217 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 RNF212BA8MTL3 300 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 K7ENP7 123 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 M0R036 132 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 OPN1MWP04001 364 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 OPN1MW2P0DN77 364 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 OPN1MW3P0DN78 364 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 AKR1C3P42330 323 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 ELLP55199 621 aaPredicted RBP8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 PRB3Q04118 309 aaPredicted RBP8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 Q6ZRM9 215 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 Q8NA96 180 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 SPOCK3Q9BQ16 436 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 C20orf24Q9BUV8 137 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
CACNA1A-248ENST00000637774 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 TMPRSS3P57727 454 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 LY6DQ14210 128 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 ZNF266Q14584 549 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 WFDC1Q9HC57 220 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 PRELID3BQ9Y3B1 194 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 CHD3Q12873 2000 aaKnown RBP8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 HIVEP3Q5T1R4 2406 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 IGKV1D-17A0A075B6S4 117 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 DPRXA6NFQ7 191 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 C17orf98A8MV24 154 aa8.1□□□□□ -1.11
CACNA1A-248ENST00000637774 SYNGR2O43760 224 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms