RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
CTSD-208ENST00000636843 A0A1B0GW55 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.3□□□□□ -0.76
CTSD-208ENST00000636843 SDCBPO00560 298 aaPredicted RBP10.3□□□□□ -0.76
CTSD-208ENST00000636843 TSPAN9O75954 239 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 SFT2D2O95562 160 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 IFNA7P01567 189 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L2P0CJ85 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L3P0CJ86 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L4P0CJ87 422 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L5P0CJ88 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L6P0CJ89 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L7P0CJ90 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 VAMP1P23763 118 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 GNG3P63215 75 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 IKZF1Q13422 519 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 OPCMLQ14982 345 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4L9Q6RFH8 374 aaPredicted RBP10.3□□□□□ -0.76
CTSD-208ENST00000636843 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 FGFRL1Q8N441 504 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 FAM216BQ8N7L0 139 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 OR10Z1Q8NGY1 313 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 C8orf46Q8TAG6 207 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 MAFIPQ8WZ33 124 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 MICU1Q9BPX6 476 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DCTN5Q9BTE1 182 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 PDCD10Q9BUL8 212 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 PKIBQ9C010 78 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 FGF23Q9GZV9 251 aaPredicted RBP10.3□□□□□ -0.76
CTSD-208ENST00000636843 ZNF286AQ9HBT8 521 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 COMMD9Q9P000 198 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 DUX4Q9UBX2 424 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 VPREB3Q9UKI3 123 aa10.3□□□□□ -0.76
CTSD-208ENST00000636843 C14orf166Q9Y224 244 aaKnown RBP10.3□□□□□ -0.76
CTSD-208ENST00000636843 DBX1A6NMT0 343 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 NPFFO15130 113 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 OR7C1O76099 320 aaPredicted RBP10.29□□□□□ -0.76
CTSD-208ENST00000636843 CXCL2P19875 107 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 BCL3P20749 454 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 HTR2BP41595 481 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 NPBWR2P48146 333 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 IL24Q13007 206 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTSD-208ENST00000636843 STUMQ69YW2 141 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 ZNF680Q8NEM1 530 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 OR5R1Q8NH85 324 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 COQ8AQ8NI60 647 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 CASTOR1Q8WTX7 329 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 SLAMF9Q96A28 289 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 TMEM230Q96A57 120 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 WDR89Q96FK6 387 aaPredicted RBP10.29□□□□□ -0.76
CTSD-208ENST00000636843 CYYR1Q96J86 154 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 RTBDNQ9BSG5 229 aaPredicted RBP10.29□□□□□ -0.76
CTSD-208ENST00000636843 HDHD3Q9BSH5 251 aaPredicted RBP10.29□□□□□ -0.76
CTSD-208ENST00000636843 DPCDQ9BVM2 203 aaPredicted RBP10.29□□□□□ -0.76
CTSD-208ENST00000636843 C12orf4Q9NQ89 552 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 SIRT7Q9NRC8 400 aa10.29□□□□□ -0.76
CTSD-208ENST00000636843 IGKV1D-8A0A087WSZ0 117 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 FXYD6-FXYD2A0A087WZ82 144 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 OR5H14A6NHG9 310 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 NKX6-3A6NJ46 265 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 TMEM210A6NLX4 147 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 RNASEK-C17orf49H0YIS7 233 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 CDIPTO14735 213 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 OR5H8P0DN80 308 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 SLC25A4P12235 298 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 PGAM2P15259 253 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 RPA2P15927 270 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 S100A11P31949 105 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 CYCSP99999 105 aaKnown RBP10.28□□□□□ -0.76
CTSD-208ENST00000636843 TMEM65Q6PI78 240 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 DHRS11Q6UWP2 260 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 Q6ZS49 121 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 Q8N7P7 452 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 ZNF2Q9BSG1 426 aaPredicted RBP10.28□□□□□ -0.76
CTSD-208ENST00000636843 RTL8AQ9BWD3 113 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 FXYD6Q9H0Q3 95 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 SPACA1Q9HBV2 294 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 MTCH1Q9NZJ7 389 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 DNAJB11Q9UBS4 358 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 M0R1W7 72 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 ARPC5O15511 151 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 MPC2O95563 127 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 TSPAN15O95858 294 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 GLAP06280 429 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 CTSDP07339 412 aaPredicted RBP10.28□□□□□ -0.76
CTSD-208ENST00000636843 UBE2E1P51965 193 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 IL13RA2Q14627 380 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 NCR3LG1Q68D85 454 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 ZNF660Q6AZW8 331 aaPredicted RBP10.28□□□□□ -0.76
CTSD-208ENST00000636843 GSG1LQ6UXU4 331 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 ZNF788Q6ZQV5 615 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 KCTD9Q7L273 389 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 H1FXQ92522 213 aaKnown RBP10.28□□□□□ -0.76
CTSD-208ENST00000636843 TNFRSF14Q92956 283 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 RAB18Q9NP72 206 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 ZNF581Q9P0T4 197 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 RCC2Q9P258 522 aaKnown RBP10.28□□□□□ -0.76
CTSD-208ENST00000636843 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
CTSD-208ENST00000636843 MAB21L2Q9Y586 359 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms