RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 FCGR3AP08637 254 aa12.38□□□□□ -0.43
LINC00339-209ENST00000635450 CDNFQ49AH0 187 aa12.38□□□□□ -0.43
LINC00339-209ENST00000635450 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
LINC00339-209ENST00000635450 IZUMO1Q8IYV9 350 aa12.38□□□□□ -0.43
LINC00339-209ENST00000635450 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
LINC00339-209ENST00000635450 GHITMQ9H3K2 345 aa12.38□□□□□ -0.43
LINC00339-209ENST00000635450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00339-209ENST00000635450 ITGB1BP1O14713 200 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 ST8SIA5O15466 376 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 FABP7O15540 132 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 FGF16O43320 207 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 AMY1AP04745 511 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 AMY2AP04746 511 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 GSTP1P09211 210 aaKnown RBP12.37□□□□□ -0.43
LINC00339-209ENST00000635450 TGFBR1P36897 503 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 SERPINB10P48595 397 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 EBI3Q14213 229 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 OR5H6Q8NGV6 325 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 EAF1Q96JC9 268 aaPredicted RBP12.37□□□□□ -0.43
LINC00339-209ENST00000635450 S1PR3Q99500 378 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 FUNDC2Q9BWH2 189 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 OR1A1Q9P1Q5 309 aa12.37□□□□□ -0.43
LINC00339-209ENST00000635450 A0A1W2PRX2 142 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
LINC00339-209ENST00000635450 RAB29O14966 203 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 MOSP00540 346 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 SMIM18P0DKX4 95 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 GNG2P59768 71 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 PITPNAQ00169 270 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 TCTEX1D4Q5JR98 221 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 HACD4Q5VWC8 232 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 ODF3L1Q8IXM7 274 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 OR13F1Q8NGS4 319 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 MRPS26Q9BYN8 205 aaKnown RBP12.36□□□□□ -0.43
LINC00339-209ENST00000635450 IFI27L2Q9H2X8 130 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 DIABLOQ9NR28 239 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 ZNF230Q9UIE0 474 aaPredicted RBP12.36□□□□□ -0.43
LINC00339-209ENST00000635450 SPATA2Q9UM82 520 aa12.36□□□□□ -0.43
LINC00339-209ENST00000635450 SAA2-SAA4A0A096LPE2 208 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 A0A0A6YYH2 397 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 A6NJ64 397 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 BET1O15155 118 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 GSTT2P0CG29 244 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 GSTT2BP0CG30 244 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-209ENST00000635450 DTYMKP23919 212 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 RPS19P39019 145 aaKnown RBP12.35□□□□□ -0.43
LINC00339-209ENST00000635450 OR3A3P47888 321 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 LSAMPQ13449 338 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 SRSF7Q16629 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00339-209ENST00000635450 PNLIPRP3Q17RR3 467 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 OXLD1Q5BKU9 147 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 KPRPQ5T749 579 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-209ENST00000635450 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 C5orf56Q8N8D9 126 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 OR10J5Q8NHC4 309 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 MAFIPQ8WZ33 124 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 R3HDM4Q96D70 268 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 ABHD14BQ96IU4 210 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-209ENST00000635450 ZNF221Q9UK13 617 aa12.35□□□□□ -0.43
LINC00339-209ENST00000635450 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
LINC00339-209ENST00000635450 DIRAS3O95661 229 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 ZNF260Q3ZCT1 412 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 CENPVQ7Z7K6 275 aaPredicted RBP12.34□□□□□ -0.43
LINC00339-209ENST00000635450 OR8H1Q8NGG4 311 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 SLC25A38Q96DW6 304 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 GINS4Q9BRT9 223 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 CABLES2Q9BTV7 478 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
LINC00339-209ENST00000635450 DCSTAMPQ9H295 470 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 RDH8Q9NYR8 311 aa12.34□□□□□ -0.43
LINC00339-209ENST00000635450 ELF5Q9UKW6 265 aaPredicted RBP12.34□□□□□ -0.43
LINC00339-209ENST00000635450 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 IGKV1-6A0A0C4DH72 117 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 GPR12P47775 334 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 VBP1P61758 197 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 NCS1P62166 190 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 IGSF11Q5DX21 431 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 Q6ZS49 121 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 Q8N6K4 173 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 NUDCD2Q8WVJ2 157 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 SLC25A46Q96AG3 418 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
LINC00339-209ENST00000635450 S100A16Q96FQ6 103 aaKnown RBP12.33□□□□□ -0.44
LINC00339-209ENST00000635450 RASL11BQ9BPW5 248 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 ST6GALNAC5Q9BVH7 336 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 TOLLIPQ9H0E2 274 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 PARP12Q9H0J9 701 aaKnown RBP12.33□□□□□ -0.44
LINC00339-209ENST00000635450 RNF150Q9ULK6 438 aa12.33□□□□□ -0.44
LINC00339-209ENST00000635450 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
LINC00339-209ENST00000635450 TRBV6-7A0A0A0MS04 114 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 CD83Q01151 205 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 UBE2NLQ5JXB2 153 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms