RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 COL4A1P02462 1669 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 MYOCOSA0A1B0GUC4 107 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 LINC01553A4QN01 128 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 FABP5P3A8MUU1 101 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 SLC17A2O00624 439 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF682O95780 498 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 OPN1SWP03999 348 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 CNTFRP26992 372 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 AGTR1P30556 359 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 GPR6P46095 362 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-213ENST00000630925 GABRA2P47869 451 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 PSG9Q00887 426 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 SRSF4Q08170 494 aaKnown RBP3.9□□□□□ -1.79
SDCBP-213ENST00000630925 PAFAH1B3Q15102 231 aaKnown RBP3.9□□□□□ -1.79
SDCBP-213ENST00000630925 SIX1Q15475 284 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF506Q5JVG8 444 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 LDLRAD2Q5SZI1 272 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 AMIGO2Q86SJ2 522 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 MRGPREQ86SM8 312 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 H1FOOQ8IZA3 346 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-213ENST00000630925 TMEM86AQ8N2M4 240 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 EXOC3-AS1Q8N2X6 119 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF615Q8N8J6 731 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 TMEM178AQ8NBL3 297 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 OR1N2Q8NGR9 330 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 MBD3L1Q8WWY6 194 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 ATOH8Q96SQ7 321 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 PBDC1Q9BVG4 233 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 SMIM3Q9BZL3 60 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 POMKQ9H5K3 350 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 SCP2D1Q9UJQ7 156 aa3.9□□□□□ -1.79
SDCBP-213ENST00000630925 OTOFQ9HC10 1997 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 MAP1BP46821 2468 aaKnown RBP3.89□□□□□ -1.79
SDCBP-213ENST00000630925 DMXL1Q9Y485 3027 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 IGLV1-36A0A0B4J1U3 117 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 IGHV4-28A0A0C4DH34 117 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 SCO2A0A1W2PP80 73 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 GMNCA6NCL1 334 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 SHISA9B4DS77 424 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 INMT-MINDY4F8WBC2 141 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 ATP6V0E1O15342 81 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 HBZP02008 142 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 RFX2P48378 723 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 NCS1P62166 190 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 EBPQ15125 230 aaKnown RBP3.89□□□□□ -1.79
SDCBP-213ENST00000630925 SSX1Q16384 188 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 GSG1Q2KHT4 349 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF718Q3SXZ3 478 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 LINC00242Q5T6M2 205 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 TSPO2Q5TGU0 170 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 SLC35E4Q6ICL7 350 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF793Q6ZN11 406 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 DGAT2L6Q6ZPD8 337 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 DEFB125Q8N687 156 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 ZNRF1Q8ND25 227 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 OR10G6Q8NH81 332 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 OR1L1Q8NH94 360 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF418Q8TF45 676 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-213ENST00000630925 CNBD2Q96M20 576 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 RDH12Q96NR8 316 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 SLC25A33Q9BSK2 321 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 NKX6-2Q9C056 277 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-213ENST00000630925 OR51I2Q9H344 312 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 PTGES2Q9H7Z7 377 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 GNB4Q9HAV0 340 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 TMEM100Q9NV29 134 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 GCN1Q92616 2671 aaKnown RBP3.89□□□□□ -1.79
SDCBP-213ENST00000630925 TTC3P53804 2025 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 A0A0G2JMZ2 1700 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 LRRC37AA6NMS7 1700 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 CHD7Q9P2D1 2997 aa3.89□□□□□ -1.79
SDCBP-213ENST00000630925 TPRP12270 2363 aaKnown RBP3.89□□□□□ -1.79
SDCBP-213ENST00000630925 FOCADQ5VW36 1801 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 TRAV30A0A087WSZ9 112 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 A0A1B0GV50 99 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 LOC102725191A0A1B0GVB3 256 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 A0A1B0GW64 132 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 C5orf63A6NC05 138 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 SPAG7O75391 227 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 SCRG1O75711 98 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 ARL6IP5O75915 188 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 AIFM1O95831 613 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 NGFP01138 241 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 EGR2P11161 476 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CPMP14384 443 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CSRP1P21291 193 aaKnown RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 G6PCP35575 357 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CXCL12P48061 93 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 CSRP3P50461 194 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 H2BFSP57053 126 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 LMO4P61968 165 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 HTR4Q13639 388 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 ECSCRQ19T08 205 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 TIMM50Q3ZCQ8 353 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 GLYATQ6IB77 296 aa3.88□□□□□ -1.79
SDCBP-213ENST00000630925 RBM23Q86U06 439 aaKnown RBP3.88□□□□□ -1.79
SDCBP-213ENST00000630925 OR8I2Q8N0Y5 310 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms