RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 Q6ZS49 121 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 C5orf56Q8N8D9 126 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 OR5H6Q8NGV6 325 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 AGMATQ9BSE5 352 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 FUNDC2Q9BWH2 189 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 TOLLIPQ9H0E2 274 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 IFI27L2Q9H2X8 130 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 OR1A1Q9P1Q5 309 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 SPATA2Q9UM82 520 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 SAA2-SAA4A0A096LPE2 208 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 A0A0A6YYH2 397 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 IGKV1-6A0A0C4DH72 117 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 A6NJ64 397 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-208ENST00000626828 SAA2P0DJI9 122 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-208ENST00000626828 DTYMKP23919 212 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 LSAMPQ13449 338 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 ZNF260Q3ZCT1 412 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 C11orf44Q8N8P7 122 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 OR13F1Q8NGS4 319 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 OR10J5Q8NHC4 309 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 WIPF2Q8TF74 440 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-208ENST00000626828 NABP2Q9BQ15 211 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 DCSTAMPQ9H295 470 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 PLSCR3Q9NRY6 295 aa13.3□□□□□ -0.28
UBE3D-208ENST00000626828 ZNF230Q9UIE0 474 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-208ENST00000626828 FBXO24O75426 580 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 TGFBR1P36897 503 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 C2orf68Q2NKX9 166 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 TMEM95Q3KNT9 176 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 ABHD14BQ96IU4 210 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 RASL11BQ9BPW5 248 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 ZNF251Q9BRH9 671 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 ST6GALNAC5Q9BVH7 336 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 MRPL20Q9BYC9 149 aaKnown RBP13.29□□□□□ -0.28
UBE3D-208ENST00000626828 PARP12Q9H0J9 701 aaKnown RBP13.29□□□□□ -0.28
UBE3D-208ENST00000626828 RDH8Q9NYR8 311 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 ELF5Q9UKW6 265 aaPredicted RBP13.29□□□□□ -0.28
UBE3D-208ENST00000626828 RNF150Q9ULK6 438 aa13.29□□□□□ -0.28
UBE3D-208ENST00000626828 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 TRBV6-7A0A0A0MS04 114 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 BET1O15155 118 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 IGHG2P01859 326 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 CSF1P09603 554 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 CD28P10747 220 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 MC5RP33032 325 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 GNG2P59768 71 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 IGSF11Q5DX21 431 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 Q8N9W7 124 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 MAFIPQ8WZ33 124 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 S100A16Q96FQ6 103 aaKnown RBP13.28□□□□□ -0.28
UBE3D-208ENST00000626828 CABLES2Q9BTV7 478 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 LIN7CQ9NUP9 197 aaKnown RBP13.28□□□□□ -0.28
UBE3D-208ENST00000626828 GAB2Q9UQC2 676 aa13.28□□□□□ -0.28
UBE3D-208ENST00000626828 CTXN2P0C2S0 81 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 CT45A6P0DMU7 189 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 CT45A5P0DMU8 189 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 CT45A7P0DMV0 189 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 GPR12P47775 334 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 F2RL1P55085 397 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 RPL39P5Q59GN2 51 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 SLC25A38Q96DW6 304 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 MRPS26Q9BYN8 205 aaKnown RBP13.27□□□□□ -0.29
UBE3D-208ENST00000626828 ABCG5Q9H222 651 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 MMP27Q9H306 513 aa13.27□□□□□ -0.29
UBE3D-208ENST00000626828 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 OR8U9P0C7N5 309 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 SMIM18P0DKX4 95 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 ACTBP60709 375 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 VBP1P61758 197 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 CD83Q01151 205 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 SLC35E3Q7Z769 313 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 ANKRD13BQ86YJ7 626 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-208ENST00000626828 OR8U1Q8NH10 309 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 CHPT1Q8WUD6 406 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 SLC25A46Q96AG3 418 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 KCTD12Q96CX2 325 aaKnown RBP13.26□□□□□ -0.29
UBE3D-208ENST00000626828 GINS4Q9BRT9 223 aa13.26□□□□□ -0.29
UBE3D-208ENST00000626828 OR5H14A6NHG9 310 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 PROP1O75360 226 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 NCS1P62166 190 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 NDUFA11Q86Y39 141 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 FOXRED2Q8IWF2 684 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 FAM71E2Q8N5Q1 922 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 OR5AN1Q8NGI8 311 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 NUDCD2Q8WVJ2 157 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 RNF5Q99942 180 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 CITED2Q99967 270 aaPredicted RBP13.25□□□□□ -0.29
UBE3D-208ENST00000626828 RBM7Q9Y580 266 aaKnown RBP13.25□□□□□ -0.29
UBE3D-208ENST00000626828 VWFP04275 2813 aa13.25□□□□□ -0.29
UBE3D-208ENST00000626828 NOTCH3Q9UM47 2321 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 IGKV1D-8A0A087WSZ0 117 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 PSMB11A5LHX3 300 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms