RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 BUB3O43684 328 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 GPR137BO60478 399 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 YIF1AO95070 293 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 CDRT1O95170 752 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 LYPD3O95274 346 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 SEMA4FO95754 770 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 FGF2P09038 288 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 OR5AL1P0C617 328 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 CXCL2P19875 107 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 OPCMLQ14982 345 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 SLC18B1Q6NT16 456 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 GLIPR1L1Q6UWM5 242 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 TIFABQ6ZNK6 161 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 SPACA3Q8IXA5 215 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 PRR22Q8IZ63 422 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 ATXN7L3BQ96GX2 97 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 OR4K3Q96R72 315 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 ZNF587Q96SQ5 575 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-206ENST00000623610 SH3BGRL3Q9H299 93 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 MEPEQ9NQ76 525 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-206ENST00000623610 ACER3Q9NUN7 267 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 NAT8Q9UHE5 227 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 ATG2BQ96BY7 2078 aa7.11□□□□□ -1.27
CDKL5-206ENST00000623610 IFITM5A6NNB3 132 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 CD2P06729 351 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 MAP2K3P46734 347 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 DCDP81605 110 aaKnown RBP7.1□□□□□ -1.27
CDKL5-206ENST00000623610 PMAIP1Q13794 54 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 GLT8D1Q68CQ7 371 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 ARPINQ7Z6K5 226 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 BLNKQ8WV28 456 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 ZNF419Q96HQ0 510 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-206ENST00000623610 NAA38Q9BRA0 125 aaKnown RBP7.1□□□□□ -1.27
CDKL5-206ENST00000623610 OR52D1Q9H346 318 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 CBLN4Q9NTU7 201 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 BOKQ9UMX3 212 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-206ENST00000623610 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 CACNA1IQ9P0X4 2223 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 COL4A2P08572 1712 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 TRBV5-7A0A0A0MS05 114 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 IGHV2OR16-5A0A0B4J2B6 119 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 NDUFB4O95168 129 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 NDUFB8O95169 186 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 RENP00797 406 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 APODP05090 189 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 TSPOP30536 169 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 ETV6P41212 452 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 DEFA3P59666 94 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 PSG7Q13046 419 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 TGIF2LYQ8IUE0 185 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 OR2T33Q8NG76 320 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 OR2G3Q8NGZ4 309 aa7.1□□□□□ -1.27
CDKL5-206ENST00000623610 PNMA8CA0A1B0GUJ8 204 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 DUXBA0A1W2PPF3 345 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 SMKR1H3BMG3 65 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 AIPO00170 330 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 GSC2O15499 205 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 SNAPC5O75971 98 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 CLDN14O95500 239 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 FGF3P11487 239 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-206ENST00000623610 CSRP1P21291 193 aaKnown RBP7.09□□□□□ -1.27
CDKL5-206ENST00000623610 GPR183P32249 361 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 G6PCP35575 357 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 APOC4P55056 127 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 GNA12Q03113 381 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 RAB35Q15286 201 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 MLF2Q15773 248 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-206ENST00000623610 ZNF726P1Q15940 193 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 PRR31Q5SQ13 230 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 RPL22L1Q6P5R6 122 aaKnown RBP7.09□□□□□ -1.27
CDKL5-206ENST00000623610 OR5A2Q8NGI9 324 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.27
CDKL5-206ENST00000623610 PBDC1Q9BVG4 233 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 OR2H1Q9GZK4 316 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 TMEM222Q9H0R3 208 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 LINC00597Q9H2U6 94 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 ISG20L2Q9H9L3 353 aaKnown RBP7.09□□□□□ -1.27
CDKL5-206ENST00000623610 RPS6KB2Q9UBS0 482 aa7.09□□□□□ -1.27
CDKL5-206ENST00000623610 SLC2A2P11168 524 aaPredicted RBP7.09□□□□□ -1.28
CDKL5-206ENST00000623610 GNB3P16520 340 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 LHX2P50458 406 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 BATFQ16520 125 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 SPANXN3Q5MJ09 141 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 TEDDM1Q5T9Z0 273 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 C8orf82Q6P1X6 216 aaPredicted RBP7.09□□□□□ -1.28
CDKL5-206ENST00000623610 RASL11AQ6T310 242 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 Q75L30 129 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 EXOC3-AS1Q8N2X6 119 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 TMEM105Q8N8V8 129 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 OR4K5Q8NGD3 323 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 BORCS7Q96B45 105 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 SLC25A33Q9BSK2 321 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 PRSS22Q9GZN4 317 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 AP4S1Q9Y587 144 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 MIA3Q5JRA6 1907 aa7.09□□□□□ -1.28
CDKL5-206ENST00000623610 KMT2EQ8IZD2 1858 aa7.08□□□□□ -1.28
CDKL5-206ENST00000623610 NCBP2LA6PVI3 153 aaKnown RBP7.08□□□□□ -1.28
CDKL5-206ENST00000623610 GFRA3O60609 400 aa7.08□□□□□ -1.28
CDKL5-206ENST00000623610 NEURL1O76050 574 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms