RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 PDCD6O75340 191 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 FUT3P21217 361 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 DEFA5Q01523 94 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 GPR176Q14439 515 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 Q499Y3 187 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 DMKNQ6E0U4 476 aaPredicted RBP8.4□□□□□ -1.06
LINC00963-214ENST00000622680 UNQ5815/PRO19632Q6UWF5 114 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 TMPRSS11AQ6ZMR5 421 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 PPP1R27Q86WC6 154 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 IL1F10Q8WWZ1 152 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 PGLYRP3Q96LB9 341 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 RDH12Q96NR8 316 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 CLCC1Q96S66 551 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 SULT4A1Q9BR01 284 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 KCNK15Q9H427 330 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 CKLFQ9UBR5 152 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 CLEC2DQ9UHP7 191 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 NUBP2Q9Y5Y2 271 aa8.4□□□□□ -1.06
LINC00963-214ENST00000622680 TRBV5-7A0A0A0MS05 114 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 FAM90A7PA6NKC0 464 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 FAM90A23PA8MXZ1 464 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 HSPA12AO43301 675 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 YPEL1O60688 119 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 CA11O75493 328 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 GPX5O75715 221 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 IGLV1-51P01701 117 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 HSPB1P04792 205 aaKnown RBP8.39□□□□□ -1.07
LINC00963-214ENST00000622680 HTD2P86397 168 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 HMGN3Q15651 99 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 ACTBL2Q562R1 376 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 C6orf141Q5SZD1 244 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 ZNF660Q6AZW8 331 aaPredicted RBP8.39□□□□□ -1.07
LINC00963-214ENST00000622680 LYPD6Q86Y78 171 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 SGPP2Q8IWX5 399 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 LFNGQ8NES3 379 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 ABHD14BQ96IU4 210 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 YPEL2Q96QA6 119 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 RETNQ9HD89 108 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 CHCHD3Q9NX63 227 aaKnown RBP8.39□□□□□ -1.07
LINC00963-214ENST00000622680 SMPD3Q9NY59 655 aaPredicted RBP8.39□□□□□ -1.07
LINC00963-214ENST00000622680 NKX1-2Q9UD57 310 aaPredicted RBP8.39□□□□□ -1.07
LINC00963-214ENST00000622680 STUB1Q9UNE7 303 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 ERGIC3Q9Y282 383 aa8.39□□□□□ -1.07
LINC00963-214ENST00000622680 RRP15Q9Y3B9 282 aaKnown RBP8.39□□□□□ -1.07
LINC00963-214ENST00000622680 H0YJW9 148 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 H7C2Y5 167 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 RGS11O94810 467 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 CA2P00918 260 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 TRGV3P03979 118 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 CT45A6P0DMU7 189 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 CT45A5P0DMU8 189 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 CT45A7P0DMV0 189 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 ARSBP15848 533 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 DCKP27707 260 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 YIF1BQ5BJH7 314 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 OR10K2Q6IF99 312 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 PYHIN1Q6K0P9 492 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 CD200R1LQ6Q8B3 271 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 ZNF554Q86TJ5 538 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 ANKRD13BQ86YJ7 626 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 TCTEX1D1Q8N7M0 179 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 GRPEL2Q8TAA5 225 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 GALMQ96C23 342 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 FLYWCH2Q96CP2 140 aaKnown RBP8.38□□□□□ -1.07
LINC00963-214ENST00000622680 DERL3Q96Q80 235 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 BABAM2Q9NXR7 383 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 CNOT2Q9NZN8 540 aaKnown RBP8.38□□□□□ -1.07
LINC00963-214ENST00000622680 METTL1Q9UBP6 276 aaKnown RBP8.38□□□□□ -1.07
LINC00963-214ENST00000622680 ADAM30Q9UKF2 790 aa8.38□□□□□ -1.07
LINC00963-214ENST00000622680 DIMT1Q9UNQ2 313 aaKnown RBP8.38□□□□□ -1.07
LINC00963-214ENST00000622680 ANKRD34BA5PLL1 514 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 OR5H14A6NHG9 310 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 GSTP1P09211 210 aaKnown RBP8.37□□□□□ -1.07
LINC00963-214ENST00000622680 MYL12AP19105 171 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 CAPGP40121 348 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 VEGFCP49767 419 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 HAGHQ16775 308 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 LY6G6FQ5SQ64 297 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 FAM71F2Q6NXP2 309 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 C6orf201Q7Z4U5 140 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 DHRSXQ8N5I4 330 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 DRAXINQ8NBI3 349 aaPredicted RBP8.37□□□□□ -1.07
LINC00963-214ENST00000622680 ZNF485Q8NCK3 441 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 SETD6Q8TBK2 473 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 RHOVQ96L33 236 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 NICN1Q9BSH3 213 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 ELOVL1Q9BW60 279 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 STEAP1Q9UHE8 339 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 SLC23A1Q9UHI7 598 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 EXOSC1Q9Y3B2 195 aaKnown RBP8.37□□□□□ -1.07
LINC00963-214ENST00000622680 WASHC3Q9Y3C0 194 aa8.37□□□□□ -1.07
LINC00963-214ENST00000622680 A8MZ25 164 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 RAB29O14966 203 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 ARPC1BO15143 372 aaKnown RBP8.36□□□□□ -1.07
LINC00963-214ENST00000622680 TFAP2AP05549 437 aa8.36□□□□□ -1.07
LINC00963-214ENST00000622680 GLAP06280 429 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms